BLASTX nr result

ID: Cimicifuga21_contig00034573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034573
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25762.1| unknown [Picea sitchensis]                             125   5e-27
ref|XP_003544903.1| PREDICTED: mitochondrial RNA-splicing protei...   123   2e-26
ref|XP_003632593.1| PREDICTED: mitoferrin-like isoform 2 [Vitis ...   122   4e-26
ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis ...   122   4e-26
emb|CAN63136.1| hypothetical protein VITISV_043146 [Vitis vinifera]   122   4e-26

>gb|ABK25762.1| unknown [Picea sitchensis]
          Length = 311

 Score =  125 bits (313), Expect = 5e-27
 Identities = 65/98 (66%), Positives = 74/98 (75%)
 Frame = +3

Query: 108 HDGGMGFWKFMLAGSIAGMVEHMAMFPVDTLKTRMQMLGXXXXXXXXXXXPHRHHLGRYL 287
           HDG + F +FM+AGSIAGMVEHMAMFP+DTLKTRMQML                 +GR L
Sbjct: 15  HDG-LSFAQFMVAGSIAGMVEHMAMFPIDTLKTRMQMLARSGGSVHSA-------VGRAL 66

Query: 288 TSMMRKEGPLGLYRGISAMGLGAGPAHAVYFTVYETCK 401
            S+++ EGPLGLYRGI AMGLGAGPAHAVYF+VYETCK
Sbjct: 67  KSIVQSEGPLGLYRGIGAMGLGAGPAHAVYFSVYETCK 104


>ref|XP_003544903.1| PREDICTED: mitochondrial RNA-splicing protein MRS3-like [Glycine
           max]
          Length = 324

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/104 (62%), Positives = 75/104 (72%)
 Frame = +3

Query: 90  DPTTTTHDGGMGFWKFMLAGSIAGMVEHMAMFPVDTLKTRMQMLGXXXXXXXXXXXPHRH 269
           D T +THDG + FW+FM+AGSIAG VEHMAMFPVDT+KTRMQ +G             RH
Sbjct: 21  DLTVSTHDG-LHFWQFMIAGSIAGCVEHMAMFPVDTVKTRMQAIGSCPVKSVTV----RH 75

Query: 270 HLGRYLTSMMRKEGPLGLYRGISAMGLGAGPAHAVYFTVYETCK 401
            L     S+++ EGP  LYRGI AMGLGAGPAHAVYF+VYETCK
Sbjct: 76  AL----KSILQSEGPSALYRGIGAMGLGAGPAHAVYFSVYETCK 115


>ref|XP_003632593.1| PREDICTED: mitoferrin-like isoform 2 [Vitis vinifera]
          Length = 265

 Score =  122 bits (305), Expect = 4e-26
 Identities = 69/129 (53%), Positives = 85/129 (65%)
 Frame = +3

Query: 15  TTIAFASPTNLLLCPSVSSVKKVMTDPTTTTHDGGMGFWKFMLAGSIAGMVEHMAMFPVD 194
           TT   ASP      P  S  +  +T    ++HDG + FW+FM+AGSIAG VEHMAMFPVD
Sbjct: 3   TTTTDASP-KFRHVPQPSDYRPEIT--VNSSHDG-LEFWQFMIAGSIAGSVEHMAMFPVD 58

Query: 195 TLKTRMQMLGXXXXXXXXXXXPHRHHLGRYLTSMMRKEGPLGLYRGISAMGLGAGPAHAV 374
           TLKTRMQ++G                L + L S+++ EGP GLYRGI+AMGLGAGP+HAV
Sbjct: 59  TLKTRMQVIGGSYPAPSIG-------LRQVLGSILKMEGPAGLYRGIAAMGLGAGPSHAV 111

Query: 375 YFTVYETCK 401
           YF+VYE CK
Sbjct: 112 YFSVYELCK 120


>ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis vinifera]
          Length = 327

 Score =  122 bits (305), Expect = 4e-26
 Identities = 69/129 (53%), Positives = 85/129 (65%)
 Frame = +3

Query: 15  TTIAFASPTNLLLCPSVSSVKKVMTDPTTTTHDGGMGFWKFMLAGSIAGMVEHMAMFPVD 194
           TT   ASP      P  S  +  +T    ++HDG + FW+FM+AGSIAG VEHMAMFPVD
Sbjct: 3   TTTTDASP-KFRHVPQPSDYRPEIT--VNSSHDG-LEFWQFMIAGSIAGSVEHMAMFPVD 58

Query: 195 TLKTRMQMLGXXXXXXXXXXXPHRHHLGRYLTSMMRKEGPLGLYRGISAMGLGAGPAHAV 374
           TLKTRMQ++G                L + L S+++ EGP GLYRGI+AMGLGAGP+HAV
Sbjct: 59  TLKTRMQVIGGSYPAPSIG-------LRQVLGSILKMEGPAGLYRGIAAMGLGAGPSHAV 111

Query: 375 YFTVYETCK 401
           YF+VYE CK
Sbjct: 112 YFSVYELCK 120


>emb|CAN63136.1| hypothetical protein VITISV_043146 [Vitis vinifera]
          Length = 263

 Score =  122 bits (305), Expect = 4e-26
 Identities = 69/129 (53%), Positives = 85/129 (65%)
 Frame = +3

Query: 15  TTIAFASPTNLLLCPSVSSVKKVMTDPTTTTHDGGMGFWKFMLAGSIAGMVEHMAMFPVD 194
           TT   ASP      P  S  +  +T    ++HDG + FW+FM+AGSIAG VEHMAMFPVD
Sbjct: 3   TTTTDASP-KFRHVPQPSDYRPEIT--VNSSHDG-LEFWQFMIAGSIAGSVEHMAMFPVD 58

Query: 195 TLKTRMQMLGXXXXXXXXXXXPHRHHLGRYLTSMMRKEGPLGLYRGISAMGLGAGPAHAV 374
           TLKTRMQ++G                L + L S+++ EGP GLYRGI+AMGLGAGP+HAV
Sbjct: 59  TLKTRMQVIGGSYPAPSIG-------LRQVLGSILKMEGPAGLYRGIAAMGLGAGPSHAV 111

Query: 375 YFTVYETCK 401
           YF+VYE CK
Sbjct: 112 YFSVYELCK 120


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