BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034500
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325338.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_002892464.1| pentatricopeptide repeat-containing protein ...   134   6e-30
ref|NP_172337.1| pentatricopeptide repeat-containing protein [Ar...   132   3e-29
ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containi...   128   6e-28

>ref|XP_002325338.1| predicted protein [Populus trichocarpa] gi|222862213|gb|EEE99719.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/123 (57%), Positives = 96/123 (78%)
 Frame = -2

Query: 487 MENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTV 308
           M+ A+ LYN+MI KG++PD IT+RSL+WGFC  + V +AVEILREMG+R ++I +S Y +
Sbjct: 353 MDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRL 412

Query: 307 VIQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSK 128
           VI GLC+N +VD AI++L+MMIS   KP+E IY+TL+K VA  GM EEA  L +KLI+ K
Sbjct: 413 VINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIERK 472

Query: 127 VLK 119
           VL+
Sbjct: 473 VLR 475



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/109 (33%), Positives = 57/109 (52%)
 Frame = -2

Query: 478 AMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTVVIQ 299
           A+ +YN ++  G+ P+ ITY SL+   C   L  E  EIL  M +  +     TY ++I 
Sbjct: 217 ALIIYN-ILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILIN 275

Query: 298 GLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIML 152
           GLCK   V+ AI     M+S +  P+   Y TL+  +   GM +EA+ +
Sbjct: 276 GLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQV 324



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/116 (26%), Positives = 61/116 (52%)
 Frame = -2

Query: 487 MENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTV 308
           +E A++ + +M+ +  SPD ITY +L+   C+  +V EA+++   +       G  TY  
Sbjct: 283 VERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNT 342

Query: 307 VIQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKL 140
           VI GL +   +D A+++ + MI     P+   + +LV G       E+A+ + +++
Sbjct: 343 VIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREM 398



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/104 (27%), Positives = 50/104 (48%)
 Frame = -2

Query: 436 PDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTVVIQGLCKNNQVDFAIEI 257
           P  +TY  LI G C+  LV  A+    +M          TY  ++  LCK   VD A+++
Sbjct: 265 PTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQV 324

Query: 256 LDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSKV 125
             ++  S+  P    Y T++ G+   G  +EA+ L  ++I+  +
Sbjct: 325 FVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGI 368


>ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/127 (54%), Positives = 91/127 (71%)
 Frame = -2

Query: 487 MENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTV 308
           ME AM LY EMI +G +PDDIT+R+L WG  R +LV +A+ IL+EM +R  +I  S +  
Sbjct: 370 MEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRF 429

Query: 307 VIQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSK 128
           VI GLCK  +VD AI++L+MM+SS  KPNE IY+ ++KGV A GM EEA  L +KL + K
Sbjct: 430 VIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELK 489

Query: 127 VLKEETM 107
           V +EETM
Sbjct: 490 VFREETM 496



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/116 (27%), Positives = 64/116 (55%)
 Frame = -2

Query: 487 MENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTV 308
           ++ A++ +++M+     PD ITY +L+   C+  +V EA+ +L  +   +   G  TY +
Sbjct: 300 LDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNI 359

Query: 307 VIQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKL 140
           VI GL K   ++ A+E+   MI     P++  + TL  G+    + E+A+++ K++
Sbjct: 360 VIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEM 415



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/115 (32%), Positives = 57/115 (49%)
 Frame = -2

Query: 484 ENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTVV 305
           + A+ +YN ++  G+ P+ +TY +L+   C      E  EIL  M          TY ++
Sbjct: 232 DTALIIYN-LLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNIL 290

Query: 304 IQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKL 140
           I GLCK   +D AI   D M+S +  P+   Y TL+  +   GM +EA+ L   L
Sbjct: 291 INGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSL 345


>ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338306|gb|EFH68723.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 555

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/124 (53%), Positives = 90/124 (72%)
 Frame = -2

Query: 487 MENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTV 308
           M+ A+ LY+ M+  G+SPDDIT RSLI+GFCR  LV EA ++L+E   R   I  STY +
Sbjct: 431 MKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRL 490

Query: 307 VIQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSK 128
           VIQGLCK  +++ AIE++++M++S  KP+ETIY  +VKGV   GM  EA+ LQKKL Q K
Sbjct: 491 VIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKLTQWK 550

Query: 127 VLKE 116
           +L+E
Sbjct: 551 LLRE 554



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/121 (28%), Positives = 59/121 (48%)
 Frame = -2

Query: 478 AMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTVVIQ 299
           AM +  +M V+G  PD +TY SL+   CR   + E   +++ +     ++ T TY  ++ 
Sbjct: 259 AMDVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLH 318

Query: 298 GLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSKVLK 119
            LC N   D   EIL++M  +S  P    Y  L+ G+    +   AI    ++++ K L 
Sbjct: 319 SLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 378

Query: 118 E 116
           +
Sbjct: 379 D 379



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/119 (26%), Positives = 60/119 (50%)
 Frame = -2

Query: 469 LYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTVVIQGLC 290
           + N M      P  ITY  LI G C+  L+  A++   +M  +K      TY  ++  + 
Sbjct: 332 ILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMS 391

Query: 289 KNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSKVLKEE 113
           K   VD AIE+L ++ S+S  P    Y +++ G+A  G+ ++A+ L   ++ + +  ++
Sbjct: 392 KEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDD 450



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/112 (28%), Positives = 53/112 (47%)
 Frame = -2

Query: 487 MENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTV 308
           +E    +   ++  G+  + +TY +L+   C  E   E  EIL  M +  Y     TY +
Sbjct: 291 LEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNI 350

Query: 307 VIQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIML 152
           +I GLCK   +  AI+    M+     P+   Y TL+  ++  GM ++AI L
Sbjct: 351 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIEL 402


>ref|NP_172337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75262899|sp|Q9FRS4.1|PPR22_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g08610 gi|9802579|gb|AAF99781.1|AC003981_31 F22O13.9
           [Arabidopsis thaliana] gi|332190196|gb|AEE28317.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/124 (52%), Positives = 89/124 (71%)
 Frame = -2

Query: 487 MENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTV 308
           M+ A+ LY++M+  G+ PDDIT RSLI+GFCR  LV EA ++L+E   R   I  STY +
Sbjct: 435 MKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRL 494

Query: 307 VIQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSK 128
           VIQGLCK  +++ AIE++++M++   KP+ETIY  +VKGV   GM  EA+ LQKKL Q K
Sbjct: 495 VIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKLKQWK 554

Query: 127 VLKE 116
           +LKE
Sbjct: 555 LLKE 558



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/121 (26%), Positives = 59/121 (48%)
 Frame = -2

Query: 478 AMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTVVIQ 299
           A+ +  +M V+G  PD +TY SL+   CR   + E   +++ +     ++ T TY  ++ 
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322

Query: 298 GLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSKVLK 119
            LC +   D   EIL++M  +S  P    Y  L+ G+    +   AI    ++++ K L 
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382

Query: 118 E 116
           +
Sbjct: 383 D 383



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/119 (26%), Positives = 60/119 (50%)
 Frame = -2

Query: 469 LYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTVVIQGLC 290
           + N M      P  ITY  LI G C+  L+  A++   +M  +K      TY  V+  + 
Sbjct: 336 ILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMS 395

Query: 289 KNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSKVLKEE 113
           K   VD AIE+L ++ ++   P    Y +++ G+A  G+ ++A+ L  +++ + +  ++
Sbjct: 396 KEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDD 454



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/112 (28%), Positives = 54/112 (48%)
 Frame = -2

Query: 487 MENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTV 308
           +E   S+   ++  G+  + +TY +L+   C  E   E  EIL  M +  Y     TY +
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNI 354

Query: 307 VIQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIML 152
           +I GLCK   +  AI+    M+     P+   Y T++  ++  GM ++AI L
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406


>ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/128 (47%), Positives = 89/128 (69%)
 Frame = -2

Query: 487 MENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTV 308
           ME+A  LY+EM+ KG+ PD+IT+ SL WGFCR + + EA E+L+EM  ++ +I  + Y  
Sbjct: 461 MESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRC 520

Query: 307 VIQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSK 128
           VI GLC+  +VD AI++LD+M+     P+E IY+ L+K VA  GM +EA  L + LI+ K
Sbjct: 521 VILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTLIKWK 580

Query: 127 VLKEETML 104
           +LK+E ML
Sbjct: 581 ILKKEIML 588



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/116 (30%), Positives = 61/116 (52%)
 Frame = -2

Query: 487 MENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTV 308
           ++ A+S Y+ M+ +  SPD ITY +L+ G C+   + E +++L  +       G  TY +
Sbjct: 391 LDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNI 450

Query: 307 VIQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKL 140
           VI GL +   ++ A E+ D M+     P+E  +++L  G       EEA  L K++
Sbjct: 451 VIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEM 506



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/108 (25%), Positives = 52/108 (48%)
 Frame = -2

Query: 436 PDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTVVIQGLCKNNQVDFAIEI 257
           P  +TY  L+ G C+  L+  A+     M          TY  ++ GLCK   +D  I++
Sbjct: 373 PTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQL 432

Query: 256 LDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLIQSKVLKEE 113
           L++++ +S  P    Y  ++ G+A  G  E A  L  +++   ++ +E
Sbjct: 433 LNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDE 480



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/116 (27%), Positives = 56/116 (48%)
 Frame = -2

Query: 484 ENAMSLYNEMIVKGVSPDDITYRSLIWGFCRGELVLEAVEILREMGRRKYKIGTSTYTVV 305
           + A+ + N ++  G+ P+ +TY +LI          E  +IL+ M          TY ++
Sbjct: 323 DTALVILN-LLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNIL 381

Query: 304 IQGLCKNNQVDFAIEILDMMISSSRKPNETIYATLVKGVAATGMTEEAIMLQKKLI 137
           + GLCK+  +D AI     M++ +  P+   Y TL+ G+   G  +E I L   L+
Sbjct: 382 LNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLV 437