BLASTX nr result

ID: Cimicifuga21_contig00034492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034492
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36952.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002270567.2| PREDICTED: uncharacterized protein LOC100260...    87   2e-15
ref|XP_002301513.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002878459.1| hypothetical protein ARALYDRAFT_486743 [Arab...    79   3e-13
ref|NP_191798.1| protein trichome birefringence-like 6 [Arabidop...    78   7e-13

>emb|CBI36952.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
 Frame = -1

Query: 300 TSFSRNFTINKVKNPILKDIHFRKLDNSSRGAVDSVGTSLLGNVSEAEVIRKSQ-----K 136
           + FSR  + + VK PI+ D H RK +N+S  A  SV   +    +E+E +  S      +
Sbjct: 65  SGFSRKNSGDGVKKPIVIDAHLRKRENASGSARISVFEGIQRRDNESESVSNSTSFEKIE 124

Query: 135 VLVNEKIEEEKGSECDVTNGRWVYDESYPLYTNSSCPFIDEGFSC 1
           V  +++IEE+K  EC +  GRWV+DESYPLYTN SCPFIDEGF C
Sbjct: 125 VHTDQRIEEKKNRECALWKGRWVFDESYPLYTNQSCPFIDEGFDC 169


>ref|XP_002270567.2| PREDICTED: uncharacterized protein LOC100260535 [Vitis vinifera]
          Length = 563

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 27/127 (21%)
 Frame = -1

Query: 300 TSFSRNFTINKVKNPILKDIHFRKLDNSS---------------------------RGAV 202
           + FSR  + + VK PI+ D H RK +N+S                            GAV
Sbjct: 125 SGFSRKNSGDGVKKPIVIDAHLRKRENASGSARISVFEGIQRRDNESEVSDEDTNKNGAV 184

Query: 201 DSVGTSLLGNVSEAEVIRKSQKVLVNEKIEEEKGSECDVTNGRWVYDESYPLYTNSSCPF 22
           D   T+   +VS +    K + V  +++IEE+K  EC +  GRWV+DESYPLYTN SCPF
Sbjct: 185 DGNFTTGQESVSNSTSFEKIE-VHTDQRIEEKKNRECALWKGRWVFDESYPLYTNQSCPF 243

Query: 21  IDEGFSC 1
           IDEGF C
Sbjct: 244 IDEGFDC 250


>ref|XP_002301513.1| predicted protein [Populus trichocarpa] gi|222843239|gb|EEE80786.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
 Frame = -1

Query: 303 FTSFSRNFTINKVKNPILKDIHFRKLDN-SSRGAVDSVGTSLLGNVSE---AEVIRKSQK 136
           F+  + N + + VK+ I  D HFR+ +N S   ++  +      N++E       ++  +
Sbjct: 66  FSDLTINSSSSDVKSSIFVDTHFREPENISGFASISRIEVQSSENIAEETRGAASQEKNE 125

Query: 135 VLVNEKIEEEKGS------ECDVTNGRWVYDESYPLYTNSSCPFIDEGFSC 1
               E I ++K        ECDVT GRW+YDE+YPLYTNSSCPFIDEGF C
Sbjct: 126 APNKEGIRKKKKGPISSMRECDVTKGRWIYDENYPLYTNSSCPFIDEGFDC 176


>ref|XP_002878459.1| hypothetical protein ARALYDRAFT_486743 [Arabidopsis lyrata subsp.
           lyrata] gi|297324297|gb|EFH54718.1| hypothetical protein
           ARALYDRAFT_486743 [Arabidopsis lyrata subsp. lyrata]
          Length = 474

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
 Frame = -1

Query: 279 TINKVKNPILKDIHFRKLDNSSRGAVDSV------GTSLLGNVSEAEVIRKSQKVLVNEK 118
           +++   +P+    HF   +N+S  +  SV      G SL+  V E   +   + V V+  
Sbjct: 65  SVSPQASPVPISTHFNSPENTSGSSKISVFEQKIRGESLVKEVREIANLTSIKVVEVSSN 124

Query: 117 IEEEKGS----ECDVTNGRWVYDESYPLYTNSSCPFIDEGFSC 1
             EEK      ECDVT G+WVYD  YPLYTN+SCPFIDEGFSC
Sbjct: 125 NGEEKTKKRIEECDVTKGKWVYDSDYPLYTNASCPFIDEGFSC 167


>ref|NP_191798.1| protein trichome birefringence-like 6 [Arabidopsis thaliana]
           gi|7340710|emb|CAB82953.1| putative protein [Arabidopsis
           thaliana] gi|21537280|gb|AAM61621.1| unknown
           [Arabidopsis thaliana] gi|110737983|dbj|BAF00927.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332646825|gb|AEE80346.1| protein trichome
           birefringence-like 6 [Arabidopsis thaliana]
          Length = 475

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
 Frame = -1

Query: 279 TINKVKNPILKDIHFRKLDNSSRGAVDSV------GTSLLGNVSEAEVIRKSQKVLV--- 127
           +++   +PIL   HF   +N+S  +  SV      G SL+  V E   +   + + +   
Sbjct: 65  SVSPQASPILISTHFNSPENTSGSSKISVFEQKISGESLVKEVREIANLTSIKVIELPSN 124

Query: 126 --NEKIEEEKGSECDVTNGRWVYDESYPLYTNSSCPFIDEGFSC 1
              +K  E++  ECDVT G+WVYD  YPLYTN+SCPFIDEGF C
Sbjct: 125 NGEDKKTEKRIEECDVTKGKWVYDSDYPLYTNASCPFIDEGFGC 168


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