BLASTX nr result

ID: Cimicifuga21_contig00034483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034483
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30066.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-li...   168   5e-40
emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]   168   5e-40
ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
ref|XP_003589939.1| Peptide chain release factor [Medicago trunc...   148   5e-34

>emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/128 (67%), Positives = 102/128 (79%)
 Frame = +2

Query: 5   ALELEEARQIKQEEMLHHYNLWDDVTKSNEFLTDLADTTKVVDNLKDLRYKVL*YTE*NH 184
           ALELEEA +I+QEEM+  YNLWDDVTKSNE L  LAD++KVVD LKDL YK         
Sbjct: 70  ALELEEASRIRQEEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYK--------- 120

Query: 185 AEEAKLITQLADMDAINYGLFKQAYNASVDVSKLMDRYELSKLLSGPYDADGACVTITAG 364
           AEEAKLITQL +MDAIN+GLF+QAYNASVDVSK + +YE+SKLL G +D +GAC+TI AG
Sbjct: 121 AEEAKLITQLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAG 180

Query: 365 SGGVYSEV 388
             G+YSE+
Sbjct: 181 PRGIYSEI 188


>ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 417

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/128 (67%), Positives = 102/128 (79%)
 Frame = +2

Query: 5   ALELEEARQIKQEEMLHHYNLWDDVTKSNEFLTDLADTTKVVDNLKDLRYKVL*YTE*NH 184
           ALELEEA +I+QEEM+  YNLWDDVTKSNE L  LAD++KVVD LKDL YK         
Sbjct: 73  ALELEEASRIRQEEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYK--------- 123

Query: 185 AEEAKLITQLADMDAINYGLFKQAYNASVDVSKLMDRYELSKLLSGPYDADGACVTITAG 364
           AEEAKLITQL +MDAIN+GLF+QAYNASVDVSK + +YE+SKLL G +D +GAC+TI AG
Sbjct: 124 AEEAKLITQLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAG 183

Query: 365 SGGVYSEV 388
             G+YSE+
Sbjct: 184 PRGIYSEI 191


>emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/128 (67%), Positives = 102/128 (79%)
 Frame = +2

Query: 5   ALELEEARQIKQEEMLHHYNLWDDVTKSNEFLTDLADTTKVVDNLKDLRYKVL*YTE*NH 184
           ALELEEA +I+QEEM+  YNLWDDVTKSNE L  LAD++KVVD LKDL YK         
Sbjct: 105 ALELEEASRIRQEEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYK--------- 155

Query: 185 AEEAKLITQLADMDAINYGLFKQAYNASVDVSKLMDRYELSKLLSGPYDADGACVTITAG 364
           AEEAKLITQL +MDAIN+GLF+QAYNASVDVSK + +YE+SKLL G +D +GAC+TI AG
Sbjct: 156 AEEAKLITQLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAG 215

Query: 365 SGGVYSEV 388
             G+YSE+
Sbjct: 216 PRGIYSEI 223


>ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|222853978|gb|EEE91525.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  154 bits (389), Expect = 7e-36
 Identities = 79/131 (60%), Positives = 97/131 (74%)
 Frame = +2

Query: 5   ALELEEARQIKQEEMLHHYNLWDDVTKSNEFLTDLADTTKVVDNLKDLRYKVL*YTE*NH 184
           ALE EEAR+IKQEEM+H  NLW+D  KSNE L  LA + K +D LKDL+YK         
Sbjct: 34  ALEHEEARRIKQEEMIHECNLWEDPAKSNEILIKLAGSAKAIDALKDLKYK--------- 84

Query: 185 AEEAKLITQLADMDAINYGLFKQAYNASVDVSKLMDRYELSKLLSGPYDADGACVTITAG 364
           AEEAKLI+QL +M+AINY LFKQAY AS+DV KL+D+YE+S+LL GPYD  GACV I AG
Sbjct: 85  AEEAKLISQLVEMEAINYQLFKQAYTASLDVRKLLDQYEMSRLLKGPYDKQGACVVIRAG 144

Query: 365 SGGVYSEVGED 397
           S G+  E+ ++
Sbjct: 145 SKGLNHEIWKE 155


>ref|XP_003589939.1| Peptide chain release factor [Medicago truncatula]
           gi|355478987|gb|AES60190.1| Peptide chain release factor
           [Medicago truncatula]
          Length = 538

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/122 (62%), Positives = 95/122 (77%)
 Frame = +2

Query: 5   ALELEEARQIKQEEMLHHYNLWDDVTKSNEFLTDLADTTKVVDNLKDLRYKVL*YTE*NH 184
           ALE+EEA  IKQEEM+   +LWDD TKSN+ L  LA++ KVVD+LKDLRYKV        
Sbjct: 201 ALEMEEASWIKQEEMVRDSDLWDDPTKSNDILVKLANSAKVVDSLKDLRYKV-------- 252

Query: 185 AEEAKLITQLADMDAINYGLFKQAYNASVDVSKLMDRYELSKLLSGPYDADGACVTITAG 364
            EEAKLI QLA+M+AI+YGL+KQAY+ASVDVS ++D+YE+SKLL GP+D  GAC+ I A 
Sbjct: 253 -EEAKLIKQLAEMNAIDYGLYKQAYDASVDVSNILDQYEISKLLKGPFDMAGACLVIKAA 311

Query: 365 SG 370
           +G
Sbjct: 312 TG 313


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