BLASTX nr result

ID: Cimicifuga21_contig00034469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034469
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284185.1| PREDICTED: uncharacterized protein LOC100264...    77   1e-12
ref|XP_002307386.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002301044.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002320038.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|NP_177935.1| uncharacterized protein [Arabidopsis thaliana] ...    64   1e-08

>ref|XP_002284185.1| PREDICTED: uncharacterized protein LOC100264413 [Vitis vinifera]
          Length = 332

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/86 (46%), Positives = 57/86 (66%)
 Frame = +2

Query: 2   GSVKDPDVTSIAEQVQEAQMVKQDSDVGGTSKAVFSKWYMVLQENKNNGISEEKVKKEEK 181
           G+  D D     +Q Q  Q+  ++SD   TS+ +FSKW+MVLQEN++ G ++E++K++ K
Sbjct: 167 GNTSD-DEEEDGDQYQHNQVGVEESDDNETSRTIFSKWFMVLQENQSCGSNKEEIKEKSK 225

Query: 182 DGCCQDRFASIVPPPNALLLMRCRSA 259
               +   A  VPPPNALLLMRCRSA
Sbjct: 226 SYGEESAVAPSVPPPNALLLMRCRSA 251


>ref|XP_002307386.1| predicted protein [Populus trichocarpa] gi|222856835|gb|EEE94382.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
 Frame = +2

Query: 20  DVTSIAEQVQEAQMVKQDSDVG-------GTSKAVFSKWYMVLQENKNN--GISEEKVKK 172
           D+TS  ++V E     Q++ VG         S+ +FSKW+M+LQEN+N+  G+ +E++K+
Sbjct: 168 DITSDDDEVDEEYEGYQENHVGVEGRNDNEDSRTIFSKWFMMLQENQNSTTGLFKEEIKQ 227

Query: 173 EEKDGCCQDRFASIVPPPNALLLMRCRSA 259
           +++    +   A  VPPPNALLLMRCRSA
Sbjct: 228 KQRSCNDESVAAPSVPPPNALLLMRCRSA 256


>ref|XP_002301044.1| predicted protein [Populus trichocarpa] gi|222842770|gb|EEE80317.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
 Frame = +2

Query: 20  DVTSIAEQVQEAQMVKQDSDVGGT-------SKAVFSKWYMVLQENKNNGISEEKVKKEE 178
           D+TS  E+  E     Q++ VG         S+ +FSKW+M+LQEN+N+     K   ++
Sbjct: 168 DITSNDEEEYEEYGEYQENHVGADGRIDKEDSRTIFSKWFMMLQENQNSTTGFFKEDAKQ 227

Query: 179 KDGCCQDRF--ASIVPPPNALLLMRCRSA 259
           K+  C D    A  VPPPNALLLMRCRSA
Sbjct: 228 KERSCNDESLAAPSVPPPNALLLMRCRSA 256


>ref|XP_002320038.1| predicted protein [Populus trichocarpa] gi|222860811|gb|EEE98353.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
 Frame = +2

Query: 20  DVTSIAEQVQEAQMVKQDSDVG-------GTSKAVFSKWYMVLQENKNNGISEEKVKKEE 178
           D+TS  E+  E     Q++ VG         S+ +FSKW+M+LQEN+N+     K   ++
Sbjct: 88  DITSNDEEEYEEYGEYQENHVGVDGRIDKEDSRTIFSKWFMMLQENQNSTTGFFKEDAKQ 147

Query: 179 KDGCCQDRF--ASIVPPPNALLLMRCRSA 259
           K+  C D    A  VPPPNALLLMRCRSA
Sbjct: 148 KERSCNDESLAAPSVPPPNALLLMRCRSA 176


>ref|NP_177935.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12324251|gb|AAG52098.1|AC012680_9 unknown protein;
           26643-27671 [Arabidopsis thaliana]
           gi|53828519|gb|AAU94369.1| At1g78110 [Arabidopsis
           thaliana] gi|55167926|gb|AAV43795.1| At1g78110
           [Arabidopsis thaliana] gi|110740293|dbj|BAF02043.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332197947|gb|AEE36068.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 342

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
 Frame = +2

Query: 2   GSVKDPDVTSIAEQVQEAQMVKQDSDVGG----TSKAVFSKWYMVLQENKNNGISEEKVK 169
           G  +  DVTS  ++ ++    +++  V G     SK VFSKW+MVLQE +NN   ++   
Sbjct: 161 GDFRHADVTSDDDEEEDDDDDEEEEVVEGEEEENSKTVFSKWFMVLQEEQNNKDDDKNNN 220

Query: 170 K-EEKDGCCQDRFASIVPPPNALLLMRCRSA 259
           K +EK           VPPPNALLLMRCRSA
Sbjct: 221 KCDEKRDLEDTETEPAVPPPNALLLMRCRSA 251


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