BLASTX nr result

ID: Cimicifuga21_contig00034451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034451
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
emb|CBI40590.3| unnamed protein product [Vitis vinifera]               77   1e-12
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]    77   1e-12
ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japo...    56   3e-06

>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = +1

Query: 1   YSFIEVDGVVHKFIVEDRSHTRSDELYALVDEISTKMKLLGLVTDLDIEIESHGMM 168
           YSFIE  G +HKFIVEDRSH+RSDE+YAL+DE+S KMKL G V D D EIE+  +M
Sbjct: 456 YSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNVNDSDSEIETACLM 511


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = +1

Query: 1   YSFIEVDGVVHKFIVEDRSHTRSDELYALVDEISTKMKLLGLVTDLDIEIESHGMM 168
           YSFIE  G +HKFIVEDRSH+RSDE+YAL+DE+S KMKL G V D D EIE+  +M
Sbjct: 413 YSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNVNDSDSEIETACLM 468


>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
          Length = 967

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = +1

Query: 1    YSFIEVDGVVHKFIVEDRSHTRSDELYALVDEISTKMKLLGLVTDLDIEIESHGMM 168
            YSFIE  G +HKFIVEDRSH+RSDE+YAL+DE+S KMKL G V D D EIE+  +M
Sbjct: 911  YSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNVNDSDSEIETACLM 966


>ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|222843153|gb|EEE80700.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 40/57 (70%)
 Frame = +1

Query: 1   YSFIEVDGVVHKFIVEDRSHTRSDELYALVDEISTKMKLLGLVTDLDIEIESHGMMK 171
           YS IE +G +HKFIVED+SH R  E+YAL++EISTKMKL     D   E+E   +M+
Sbjct: 384 YSVIEGEGEIHKFIVEDKSHPRHYEIYALLNEISTKMKLQITEDDFKPELEELLLME 440


>gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
          Length = 510

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/42 (54%), Positives = 34/42 (80%)
 Frame = +1

Query: 1   YSFIEVDGVVHKFIVEDRSHTRSDELYALVDEISTKMKLLGL 126
           YSFIE+DG +HKF+VED+SH R +E+Y  ++ ++  MKL+GL
Sbjct: 461 YSFIELDGTMHKFLVEDKSHPRFEEVYNTLNSVTMTMKLVGL 502


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