BLASTX nr result

ID: Cimicifuga21_contig00034450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034450
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270380.2| PREDICTED: uncharacterized protein At1g28695...   164   1e-38
ref|XP_002511046.1| pentatricopeptide repeat-containing protein,...   162   5e-38
ref|XP_004139012.1| PREDICTED: uncharacterized protein At1g28695...   159   3e-37
ref|XP_002270120.2| PREDICTED: uncharacterized protein At1g28695...   154   1e-35
emb|CBI16692.3| unnamed protein product [Vitis vinifera]              154   1e-35

>ref|XP_002270380.2| PREDICTED: uncharacterized protein At1g28695 [Vitis vinifera]
          Length = 341

 Score =  164 bits (415), Expect = 1e-38
 Identities = 80/161 (49%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
 Frame = -3

Query: 474 MYSSKKHVRDWVITSIVLSVVMFVSIWSPSFTK-FLXXXXXXXXXXXYKATVV--TPRDE 304
           M   K H  ++ I  ++   +++V +W+PS  K F             K      +  +E
Sbjct: 1   MNFQKNHAANFAILCLLFLGLLYVFVWTPSLNKPFFPFQNYQCRSSTSKMMESGDSHTNE 60

Query: 303 LETALSGASMANQTLIIAILNKAYIEGEKPMLDIFLESFWLGEGTQFLIDHLLLVAMDQI 124
           LE ALS ASMA++T+I+A++NKAY++G+K MLD+FL+ FWLGEGT+ L+DHLLLVA+DQ 
Sbjct: 61  LERALSKASMADKTVILAMINKAYVDGDKTMLDLFLDGFWLGEGTRGLLDHLLLVAVDQT 120

Query: 123 AFDRCKFLQLHCYRLVTDGVDFGGEKLYMSRDFINMMWRRT 1
           + +RCKFL LHCY+L T+GVDF GEK+Y+S DF+ MMWRRT
Sbjct: 121 SLERCKFLHLHCYKLETEGVDFSGEKMYLSEDFMKMMWRRT 161


>ref|XP_002511046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550161|gb|EEF51648.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 360

 Score =  162 bits (409), Expect = 5e-38
 Identities = 76/108 (70%), Positives = 94/108 (87%)
 Frame = -3

Query: 324 VVTPRDELETALSGASMANQTLIIAILNKAYIEGEKPMLDIFLESFWLGEGTQFLIDHLL 145
           V + RD LE+ L+ AS AN+TLIIA++NKAY+EG+KPMLD+FL+SFWLGE T+ LI+HLL
Sbjct: 71  VTSHRDALESGLAEASTANKTLIIAMVNKAYVEGDKPMLDMFLDSFWLGEDTRDLINHLL 130

Query: 144 LVAMDQIAFDRCKFLQLHCYRLVTDGVDFGGEKLYMSRDFINMMWRRT 1
           LVA+DQ A++RCKFL+LHCY+L TDGV F GEK+YMS DFI MMWRRT
Sbjct: 131 LVAVDQTAYERCKFLRLHCYKLETDGVAFDGEKVYMSDDFIKMMWRRT 178


>ref|XP_004139012.1| PREDICTED: uncharacterized protein At1g28695-like [Cucumis sativus]
           gi|449505304|ref|XP_004162430.1| PREDICTED:
           uncharacterized protein At1g28695-like [Cucumis sativus]
          Length = 358

 Score =  159 bits (402), Expect = 3e-37
 Identities = 77/111 (69%), Positives = 92/111 (82%), Gaps = 4/111 (3%)
 Frame = -3

Query: 321 VTPRDELETALSGASMANQTLIIAILNKAYIEGEK----PMLDIFLESFWLGEGTQFLID 154
           V PRDELE AL+ ASMAN+T+IIA++NKAY   E      MLD+FL+SFWLGEGT+ L+ 
Sbjct: 61  VKPRDELELALAKASMANKTVIIAVVNKAYANQETGAVTTMLDVFLDSFWLGEGTRPLVK 120

Query: 153 HLLLVAMDQIAFDRCKFLQLHCYRLVTDGVDFGGEKLYMSRDFINMMWRRT 1
           H+LLV +DQ A+DRC+FL L+C+RLVTDGVDFGGEKLYMS DFI MMWRRT
Sbjct: 121 HILLVTVDQTAYDRCQFLHLNCFRLVTDGVDFGGEKLYMSEDFIKMMWRRT 171


>ref|XP_002270120.2| PREDICTED: uncharacterized protein At1g28695-like [Vitis vinifera]
          Length = 346

 Score =  154 bits (388), Expect = 1e-35
 Identities = 73/112 (65%), Positives = 92/112 (82%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 KATVVTPRDELETALSGASMANQTLIIAILNKAYIEGEKP-MLDIFLESFWLGEGTQFLI 157
           KA  V P+D+LE ALS ASM N+T+II I+NKAY+EG+   MLD+FLESFW+GEGT+ + 
Sbjct: 40  KALEVVPQDDLEAALSKASMPNKTVIITIVNKAYVEGDDTSMLDLFLESFWIGEGTREMA 99

Query: 156 DHLLLVAMDQIAFDRCKFLQLHCYRLVTDGVDFGGEKLYMSRDFINMMWRRT 1
           DHLL+VA+DQ AFDRC F +LHCY++V++  D  GEKLYMS+DFI MMWRRT
Sbjct: 100 DHLLVVALDQTAFDRCIFRRLHCYKMVSEDGDMDGEKLYMSKDFIKMMWRRT 151


>emb|CBI16692.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  154 bits (388), Expect = 1e-35
 Identities = 73/112 (65%), Positives = 92/112 (82%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 KATVVTPRDELETALSGASMANQTLIIAILNKAYIEGEKP-MLDIFLESFWLGEGTQFLI 157
           KA  V P+D+LE ALS ASM N+T+II I+NKAY+EG+   MLD+FLESFW+GEGT+ + 
Sbjct: 40  KALEVVPQDDLEAALSKASMPNKTVIITIVNKAYVEGDDTSMLDLFLESFWIGEGTREMA 99

Query: 156 DHLLLVAMDQIAFDRCKFLQLHCYRLVTDGVDFGGEKLYMSRDFINMMWRRT 1
           DHLL+VA+DQ AFDRC F +LHCY++V++  D  GEKLYMS+DFI MMWRRT
Sbjct: 100 DHLLVVALDQTAFDRCIFRRLHCYKMVSEDGDMDGEKLYMSKDFIKMMWRRT 151


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