BLASTX nr result

ID: Cimicifuga21_contig00034420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034420
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26976.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002282955.1| PREDICTED: reticulon-like protein B9-like [V...   115   4e-24
ref|XP_002318538.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002527026.1| conserved hypothetical protein [Ricinus comm...   112   4e-23
ref|XP_003528960.1| PREDICTED: reticulon-like protein B9-like [G...   110   1e-22

>emb|CBI26976.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/84 (61%), Positives = 69/84 (82%)
 Frame = +1

Query: 1   SDSDYQSLAPRKLFRRERPLHSILGGGQVADILLWRNRSISAAMLMGFTAIWFLFEVVEY 180
           SDSD Q   P +LF  ++ +H++LGGG+VADILLWRN+ +SAA+L+GFT IWFLFEV+EY
Sbjct: 57  SDSDEQPETPIRLFDHQKSIHALLGGGKVADILLWRNKYVSAAILIGFTIIWFLFEVLEY 116

Query: 181 HFLTLLRHIAITVMLVVFIWSNGA 252
           HF+TLL +  + +ML +FIWSNGA
Sbjct: 117 HFVTLLCYSMLFLMLAIFIWSNGA 140


>ref|XP_002282955.1| PREDICTED: reticulon-like protein B9-like [Vitis vinifera]
          Length = 216

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/84 (61%), Positives = 69/84 (82%)
 Frame = +1

Query: 1   SDSDYQSLAPRKLFRRERPLHSILGGGQVADILLWRNRSISAAMLMGFTAIWFLFEVVEY 180
           SDSD Q   P +LF  ++ +H++LGGG+VADILLWRN+ +SAA+L+GFT IWFLFEV+EY
Sbjct: 6   SDSDEQPETPIRLFDHQKSIHALLGGGKVADILLWRNKYVSAAILIGFTIIWFLFEVLEY 65

Query: 181 HFLTLLRHIAITVMLVVFIWSNGA 252
           HF+TLL +  + +ML +FIWSNGA
Sbjct: 66  HFVTLLCYSMLFLMLAIFIWSNGA 89


>ref|XP_002318538.1| predicted protein [Populus trichocarpa] gi|222859211|gb|EEE96758.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/88 (56%), Positives = 65/88 (73%)
 Frame = +1

Query: 1   SDSDYQSLAPRKLFRRERPLHSILGGGQVADILLWRNRSISAAMLMGFTAIWFLFEVVEY 180
           SDSD ++    KLF R+RP+ S+LGGGQVA +LLW N+ +SAA+  G T +WFLFEV EY
Sbjct: 6   SDSDNETTPRTKLFGRQRPIRSVLGGGQVAGVLLWENKKVSAALSFGMTILWFLFEVAEY 65

Query: 181 HFLTLLRHIAITVMLVVFIWSNGAALFD 264
           +F+TL  HI+IT ML+VFIW   A  F+
Sbjct: 66  NFVTLFSHISITAMLIVFIWCTSAEFFN 93


>ref|XP_002527026.1| conserved hypothetical protein [Ricinus communis]
           gi|223533661|gb|EEF35398.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/89 (58%), Positives = 65/89 (73%)
 Frame = +1

Query: 1   SDSDYQSLAPRKLFRRERPLHSILGGGQVADILLWRNRSISAAMLMGFTAIWFLFEVVEY 180
           SDSD       KLF R R LH+ILG G VAD+LLW+N+ +SA ML+GFT IWFLFEVVEY
Sbjct: 10  SDSDDGYSPSTKLFGRRRSLHAILGRGHVADVLLWKNKYLSAGMLLGFTMIWFLFEVVEY 69

Query: 181 HFLTLLRHIAITVMLVVFIWSNGAALFDR 267
           HF+TLL H+ +  ++++FIWSN A    R
Sbjct: 70  HFITLLCHLLLIFLVILFIWSNSAGFIKR 98


>ref|XP_003528960.1| PREDICTED: reticulon-like protein B9-like [Glycine max]
          Length = 222

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/88 (59%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   SDSDYQSLAPR-KLFRRERPLHSILGGGQVADILLWRNRSISAAMLMGFTAIWFLFEVVE 177
           SDS+ + +  R KLF  E+P+H +LGGG+VAD+LLWR+R +S A+L G T IWFLFE+VE
Sbjct: 7   SDSENEIIGARAKLFGHEKPIHEVLGGGKVADMLLWRDRYVSGALLGGMTVIWFLFEIVE 66

Query: 178 YHFLTLLRHIAITVMLVVFIWSNGAALF 261
           Y+F+ LL HI+IT MLV+FIWS  A +F
Sbjct: 67  YNFVALLCHISITTMLVLFIWSTVADIF 94


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