BLASTX nr result

ID: Cimicifuga21_contig00034416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034416
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70108.1| hypothetical protein VITISV_002044 [Vitis vinifera]   141   5e-32
ref|XP_003516621.1| PREDICTED: uncharacterized protein LOC100810...   139   2e-31
ref|XP_003611559.1| Profilin [Medicago truncatula] gi|355512894|...   137   7e-31
ref|XP_003538786.1| PREDICTED: uncharacterized protein LOC100795...   133   2e-29
ref|XP_002525284.1| conserved hypothetical protein [Ricinus comm...   128   4e-28

>emb|CAN70108.1| hypothetical protein VITISV_002044 [Vitis vinifera]
          Length = 607

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/139 (51%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
 Frame = +1

Query: 61  SGRCFGM---IWLMLSLFTVVFAADELSMYVAQPTTLKLSSGLLVENSPGSRSGAGVVCQ 231
           +G CF M   ++L   +F  +  A+E ++ V Q T L++S  L VENSPGSR G  V+C+
Sbjct: 7   AGICFLMFCIVFLTFPIFPSIAFANEHALVVGQSTILQVSPWLAVENSPGSRPGTAVLCE 66

Query: 232 RIHIHGLSRRHNLKKYAHSXXXXXXXXDKSPTPRLPNAEVCFHRNISLGIGMCPQGQWEK 411
           R+ I GLSR  NL+K++HS        + S   RLPN EVCFHRN SLGIGMCPQGQWEK
Sbjct: 67  RVQIRGLSRIKNLRKFSHSVKVKVSVTNSSA--RLPNVEVCFHRNESLGIGMCPQGQWEK 124

Query: 412 VMQGSWIHPMSPYDNKLLD 468
           + +G W+  MSP+D K+LD
Sbjct: 125 LTKGPWVRSMSPFDQKVLD 143


>ref|XP_003516621.1| PREDICTED: uncharacterized protein LOC100810145 [Glycine max]
          Length = 491

 Score =  139 bits (350), Expect = 2e-31
 Identities = 70/127 (55%), Positives = 85/127 (66%)
 Frame = +1

Query: 88  LMLSLFTVVFAADELSMYVAQPTTLKLSSGLLVENSPGSRSGAGVVCQRIHIHGLSRRHN 267
           L L    V+  ADE S+ + Q +TL+LS GL V NSP S+ GA VV +R+HIHGLSR  N
Sbjct: 18  LCLWASAVLVFADERSLCLTQNSTLQLSRGLPVGNSPASKPGATVVVERVHIHGLSRFRN 77

Query: 268 LKKYAHSXXXXXXXXDKSPTPRLPNAEVCFHRNISLGIGMCPQGQWEKVMQGSWIHPMSP 447
           L K+AHS          +   RLPN EVCFHRN+SL  GMCP GQWEKV +GSW   MSP
Sbjct: 78  LGKFAHSFKVKVLPLPTNSNVRLPNIEVCFHRNVSLVAGMCPHGQWEKVTKGSWARSMSP 137

Query: 448 YDNKLLD 468
           +D+K+LD
Sbjct: 138 FDHKILD 144


>ref|XP_003611559.1| Profilin [Medicago truncatula] gi|355512894|gb|AES94517.1| Profilin
           [Medicago truncatula]
          Length = 485

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/127 (51%), Positives = 88/127 (69%)
 Frame = +1

Query: 88  LMLSLFTVVFAADELSMYVAQPTTLKLSSGLLVENSPGSRSGAGVVCQRIHIHGLSRRHN 267
           L+ +   +V A ++ S+++ + TTL LS GL V NSPGS+ G  ++ +R+HIHGLSR  N
Sbjct: 17  LLWASAVLVLANEQRSLFIVENTTLPLSRGLPVRNSPGSKPGVTLIVERVHIHGLSRFRN 76

Query: 268 LKKYAHSXXXXXXXXDKSPTPRLPNAEVCFHRNISLGIGMCPQGQWEKVMQGSWIHPMSP 447
           L K+AHS        + +   R+PN EVCFHRN SL  GMCPQGQWEK ++GSW+  MSP
Sbjct: 77  LVKFAHSVKVKVFPANSNV--RVPNIEVCFHRNASLATGMCPQGQWEKAVKGSWVRTMSP 134

Query: 448 YDNKLLD 468
           +D+KLLD
Sbjct: 135 FDHKLLD 141


>ref|XP_003538786.1| PREDICTED: uncharacterized protein LOC100795492 [Glycine max]
          Length = 491

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/127 (53%), Positives = 83/127 (65%)
 Frame = +1

Query: 88  LMLSLFTVVFAADELSMYVAQPTTLKLSSGLLVENSPGSRSGAGVVCQRIHIHGLSRRHN 267
           L L    V+  ADE S+ + Q  TL+LS GL V NSPGS+ GA V+ +R+HIHGLSR  N
Sbjct: 18  LCLWASAVLVFADEHSLCLTQNATLQLSRGLPVGNSPGSKPGATVIVERVHIHGLSRFRN 77

Query: 268 LKKYAHSXXXXXXXXDKSPTPRLPNAEVCFHRNISLGIGMCPQGQWEKVMQGSWIHPMSP 447
           L K+AHS          +   RLPN EVCFHRN+SL  GMC  GQWEKV +GSW   MS 
Sbjct: 78  LGKFAHSIKVKVLPLPTNSNVRLPNIEVCFHRNVSLVAGMCRHGQWEKVTKGSWARSMSL 137

Query: 448 YDNKLLD 468
           +D+K+LD
Sbjct: 138 FDHKILD 144


>ref|XP_002525284.1| conserved hypothetical protein [Ricinus communis]
           gi|223535442|gb|EEF37112.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 539

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/143 (44%), Positives = 91/143 (63%)
 Frame = +1

Query: 40  TSGRCQFSGRCFGMIWLMLSLFTVVFAADELSMYVAQPTTLKLSSGLLVENSPGSRSGAG 219
           T+  C  S     ++ L  S F  + +A E S+ V + + L+LS  L V  SPG++ G+ 
Sbjct: 4   TAQTCLSSLFIIQILLLTFSFFCSIVSAQERSLVVGESSKLQLSPSLQVFKSPGTKPGSL 63

Query: 220 VVCQRIHIHGLSRRHNLKKYAHSXXXXXXXXDKSPTPRLPNAEVCFHRNISLGIGMCPQG 399
           V+C+R++IHGLSR  NL+K++H+          S + R PN EVCFHRN SL  GMCPQG
Sbjct: 64  VLCERVYIHGLSRLKNLQKFSHTLKVTISH--SSSSLRRPNVEVCFHRNASLATGMCPQG 121

Query: 400 QWEKVMQGSWIHPMSPYDNKLLD 468
           +WEKV +G W+  MSP+D+K+LD
Sbjct: 122 KWEKVDKGPWVRAMSPFDHKILD 144


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