BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034409
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi...   212   2e-53
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]   212   2e-53
ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
ref|XP_002526080.1| pentatricopeptide repeat-containing protein,...   205   3e-51
ref|NP_198751.1| pentatricopeptide repeat-containing protein [Ar...   203   1e-50

>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
           protein product [Vitis vinifera]
          Length = 676

 Score =  212 bits (540), Expect = 2e-53
 Identities = 104/167 (62%), Positives = 129/167 (77%)
 Frame = +1

Query: 1   DRMMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKC 180
           D M+G G+  D ATVVSVLP C+ LK+L+ GR VH LVE K LG  I+V NS+++MY KC
Sbjct: 213 DWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKC 272

Query: 181 GCVYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALL 360
           G + EA++IF +M +RDVVSWT MM GY+LNGDARSAL LC  MQ E ++PN VT+A++L
Sbjct: 273 GNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVL 332

Query: 361 SACISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVELS 501
           SAC S   L HG+C+HGW  R KLES+VIVET+LID+YAKCN V LS
Sbjct: 333 SACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379



 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/163 (33%), Positives = 91/163 (55%)
 Frame = +1

Query: 7   MMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCGC 186
           M  + V  +  T+ SVL ACASL  L+ GR +H    +++L + + V  ++++MY KC  
Sbjct: 316 MQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNN 375

Query: 187 VYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALLSA 366
           V  +  +F +  ++    W A++ G + NG +R A+ L   M +E + PN  T+ +LL A
Sbjct: 376 VNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA 435

Query: 367 CISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVE 495
               +DL   + +HG++ R    S + V T LID+Y+KC  +E
Sbjct: 436 YAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLE 478



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/155 (35%), Positives = 79/155 (50%)
 Frame = +1

Query: 31  DRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCGCVYEARLIF 210
           D  T   V+ AC      + G L+H         +   V+NS++ MY  CG +  AR +F
Sbjct: 122 DNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVF 181

Query: 211 DQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALLSACISSSDLN 390
           D M ER +VSW  M+ GY  NG  + AL +   M  +GI P+  TV ++L  C    +L 
Sbjct: 182 DLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELE 241

Query: 391 HGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVE 495
            G+ VH  V    L  D+ V  SL+D+YAKC  ++
Sbjct: 242 VGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMD 276



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 47/167 (28%), Positives = 95/167 (56%), Gaps = 3/167 (1%)
 Frame = +1

Query: 4   RMMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCG 183
           +M+ + V  + AT+ S+LPA A L DLQ+ R +H  + +    + I V   ++++Y KCG
Sbjct: 416 QMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCG 475

Query: 184 CVYEARLIFDQMI--ERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAAL 357
            +  A  IF+ +   ++D+++W+A++ GY ++G   +A++L   M   G++PN +T  ++
Sbjct: 476 SLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSI 535

Query: 358 LSACISSSDLNHGKCVHGWVTR-HKLESDVIVETSLIDLYAKCNRVE 495
           L AC  +  ++ G  +  ++   +++       T +IDL  +  R+E
Sbjct: 536 LHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLE 582



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
 Frame = +1

Query: 49  SVLPACASLKDLQRGRLVHELVEQKRLGNSIA---VRNSMVNMYGKCGCVYEARLIFDQM 219
           S+L  C S K +   + +H       L +S     + +S+   Y   GC   AR +FD++
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL 82

Query: 220 IERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIR-PNSVTVAALLSACISSSDLNHG 396
               + SW AM+  Y  +G +  AL L + M   G R P++ T   ++ AC        G
Sbjct: 83  RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142

Query: 397 KCVHGWVTRHKLESDVIVETSLIDLYAKCNRVELS 501
             +H        +SD  V+ SL+ +Y  C  +E++
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVA 177


>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  212 bits (540), Expect = 2e-53
 Identities = 104/167 (62%), Positives = 129/167 (77%)
 Frame = +1

Query: 1   DRMMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKC 180
           D M+G G+  D ATVVSVLP C+ LK+L+ GR VH LVE K LG  I+V NS+++MY KC
Sbjct: 213 DWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKC 272

Query: 181 GCVYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALL 360
           G + EA++IF +M +RDVVSWT MM GY+LNGDARSAL LC  MQ E ++PN VT+A++L
Sbjct: 273 GNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVL 332

Query: 361 SACISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVELS 501
           SAC S   L HG+C+HGW  R KLES+VIVET+LID+YAKCN V LS
Sbjct: 333 SACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379



 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/163 (33%), Positives = 91/163 (55%)
 Frame = +1

Query: 7   MMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCGC 186
           M  + V  +  T+ SVL ACASL  L+ GR +H    +++L + + V  ++++MY KC  
Sbjct: 316 MQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNN 375

Query: 187 VYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALLSA 366
           V  +  +F +  ++    W A++ G + NG +R A+ L   M +E + PN  T+ +LL A
Sbjct: 376 VNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA 435

Query: 367 CISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVE 495
               +DL   + +HG++ R    S + V T LID+Y+KC  +E
Sbjct: 436 YAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLE 478



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/155 (35%), Positives = 79/155 (50%)
 Frame = +1

Query: 31  DRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCGCVYEARLIF 210
           D  T   V+ AC      + G L+H         +   V+NS++ MY  CG +  AR +F
Sbjct: 122 DNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVF 181

Query: 211 DQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALLSACISSSDLN 390
           D M ER +VSW  M+ GY  NG  + AL +   M  +GI P+  TV ++L  C    +L 
Sbjct: 182 DLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELE 241

Query: 391 HGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVE 495
            G+ VH  V    L  D+ V  SL+D+YAKC  ++
Sbjct: 242 VGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMD 276



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 47/167 (28%), Positives = 95/167 (56%), Gaps = 3/167 (1%)
 Frame = +1

Query: 4   RMMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCG 183
           +M+ + V  + AT+ S+LPA A L DLQ+ R +H  + +    + I V   ++++Y KCG
Sbjct: 416 QMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCG 475

Query: 184 CVYEARLIFDQMI--ERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAAL 357
            +  A  IF+ +   ++D+++W+A++ GY ++G   +A++L   M   G++PN +T  ++
Sbjct: 476 SLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSI 535

Query: 358 LSACISSSDLNHGKCVHGWVTR-HKLESDVIVETSLIDLYAKCNRVE 495
           L AC  +  ++ G  +  ++   +++       T +IDL  +  R+E
Sbjct: 536 LHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLE 582



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
 Frame = +1

Query: 49  SVLPACASLKDLQRGRLVHELVEQKRLGNSIA---VRNSMVNMYGKCGCVYEARLIFDQM 219
           S+L  C S K +   + +H       L +S     + +S+   Y  CGC   AR +FD++
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDEL 82

Query: 220 IERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIR-PNSVTVAALLSACISSSDLNHG 396
               + SW AM+  Y  +G +  AL L + M   G R P++ T   ++ AC        G
Sbjct: 83  RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142

Query: 397 KCVHGWVTRHKLESDVIVETSLIDLYAKCNRVELS 501
             +H        +SD  V+ SL+ +Y  C  +E++
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVA 177


>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  206 bits (523), Expect = 2e-51
 Identities = 101/167 (60%), Positives = 133/167 (79%)
 Frame = +1

Query: 1   DRMMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKC 180
           ++M+  GV +D A+VVSVLPAC  LK+L+ GR VH LVE+K LG  I V N++V+MY KC
Sbjct: 212 NQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAKC 270

Query: 181 GCVYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALL 360
           G + EARL+FD M+ERDVVSWT+M+ GY+LNGDA+SAL+L   MQ+EG+RPNSVT+A +L
Sbjct: 271 GSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALIL 330

Query: 361 SACISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVELS 501
            AC S ++L  G+C+HGWV + +L S+V VETSLID+YAKCN + LS
Sbjct: 331 LACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLS 377



 Score =  105 bits (262), Expect = 4e-21
 Identities = 59/155 (38%), Positives = 88/155 (56%)
 Frame = +1

Query: 31  DRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCGCVYEARLIF 210
           D  T   V+ AC+ L  ++ GR++H L    + G+ + V NS++ MY  CG V EAR +F
Sbjct: 121 DNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVF 180

Query: 211 DQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALLSACISSSDLN 390
           D M E+ VVSW  M+ GY  NG A +AL +   M   G+  +  +V ++L AC    +L 
Sbjct: 181 DAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELE 240

Query: 391 HGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVE 495
            G+ VHG V   K+    IV  +L+D+YAKC  ++
Sbjct: 241 VGRRVHGLV-EEKVLGKKIVSNALVDMYAKCGSMD 274



 Score =  102 bits (255), Expect = 3e-20
 Identities = 56/163 (34%), Positives = 93/163 (57%)
 Frame = +1

Query: 7   MMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCGC 186
           M  +G+  +  T+  +L ACASL +L+ GR +H  V ++RL + +AV  S+++MY KC C
Sbjct: 314 MQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNC 373

Query: 187 VYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALLSA 366
           +  +  +F +   +  V W A++ G V N  A  A+ L   M +EG+  N+ T  +LL A
Sbjct: 374 LGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPA 433

Query: 367 CISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVE 495
               +DL     ++ ++ R    S++ V TSLID+Y+KC  +E
Sbjct: 434 YGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLE 476



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/167 (26%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
 Frame = +1

Query: 4   RMMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCG 183
           +M+ +GV ++ AT  S+LPA   L DLQ    ++  + +    ++I V  S++++Y KCG
Sbjct: 414 KMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCG 473

Query: 184 CVYEARLIFD--QMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAAL 357
            +  A  IF+   +  +D+  W+ ++ GY ++G   +A++L   M   G++PN VT  ++
Sbjct: 474 SLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSV 533

Query: 358 LSACISSSDLNHGKCVHGWVTR-HKLESDVIVETSLIDLYAKCNRVE 495
           L +C  +  ++ G  +  ++ + H+   +    T ++DL  +  R++
Sbjct: 534 LQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMD 580



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
 Frame = +1

Query: 136 SIAVRNSMVNMYGKCGCVYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPM- 312
           SI +R+ +V  Y  CG V+ AR +FD++ +R  + +  M+  Y+  GD   A+ + L M 
Sbjct: 54  SIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEML 113

Query: 313 QLEGIRPNSVTVAALLSACISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRV 492
             +   P++ T   ++ AC     + +G+ +HG     K  S + V  SL+ +Y  C  V
Sbjct: 114 GSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEV 173

Query: 493 E 495
           E
Sbjct: 174 E 174


>ref|XP_002526080.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534577|gb|EEF36274.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 502

 Score =  205 bits (522), Expect = 3e-51
 Identities = 100/167 (59%), Positives = 130/167 (77%)
 Frame = +1

Query: 1   DRMMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKC 180
           ++M+  GV +D A+VVSVLPAC  LK+L+ GR VH  VE K LGN IA RN++++MY KC
Sbjct: 147 NQMVDLGVEIDCASVVSVLPACGHLKELEMGRRVHATVEDKDLGNKIAARNALIDMYAKC 206

Query: 181 GCVYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALL 360
           G + EARL+FD M ERDV+SWT+M+ GY+LNGD +SAL L   MQ+E I P+SVT+A++L
Sbjct: 207 GSMAEARLVFDGMDERDVISWTSMINGYILNGDEKSALTLFRTMQMERIIPSSVTIASVL 266

Query: 361 SACISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVELS 501
           SACI+  D   G+C HGW  R  L+S++IVETSLID+YAKCNRV+LS
Sbjct: 267 SACINLKD---GRCFHGWTMRQNLDSEIIVETSLIDMYAKCNRVDLS 310



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/152 (32%), Positives = 77/152 (50%)
 Frame = +1

Query: 40  TVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCGCVYEARLIFDQM 219
           T+ SVL AC +LKD   GR  H    ++ L + I V  S+++MY KC  V  +  +  + 
Sbjct: 261 TIASVLSACINLKD---GRCFHGWTMRQNLDSEIIVETSLIDMYAKCNRVDLSYGVLRRT 317

Query: 220 IERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALLSACISSSDLNHGK 399
                  W AM+ G + N  A  A+ L   M L+ + P+  T  +LL A    +DL   K
Sbjct: 318 SGERTAPWNAMLSGCIHNDLATEAITLFKQMLLKKVEPDGATFNSLLPAYAILADLLPAK 377

Query: 400 CVHGWVTRHKLESDVIVETSLIDLYAKCNRVE 495
            +H ++ +    S + V T LID+Y+KC  +E
Sbjct: 378 NIHCYLKKTGFLSGLEVATCLIDIYSKCGSLE 409



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
 Frame = +1

Query: 31  DRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCGCVYEARLIF 210
           D AT  S+LPA A L DL   + +H  +++    + + V   ++++Y KCG +  A  IF
Sbjct: 356 DGATFNSLLPAYAILADLLPAKNIHCYLKKTGFLSGLEVATCLIDIYSKCGSLESAHRIF 415

Query: 211 DQMI--ERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALLSAC 369
           + +    RD+ +W+ ++ GY ++G   +A++L   M   G+RPN VT  ++L AC
Sbjct: 416 NAIPIGVRDIFAWSVIISGYGMHGHGETAVSLFRQMVQSGVRPNEVTFTSILHAC 470



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/151 (29%), Positives = 68/151 (45%)
 Frame = +1

Query: 31  DRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCGCVYEARLIF 210
           D  T   V+ AC+ L  ++ G+++H    ++                        A  IF
Sbjct: 79  DNYTYPVVIKACSELGLIELGKMIHGQTVKEA-----------------------AERIF 115

Query: 211 DQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALLSACISSSDLN 390
           D M ER V+SW  M+ GY  NG A  AL +   M   G+  +  +V ++L AC    +L 
Sbjct: 116 DVMKERSVISWNIMINGYFKNGCAEKALMVFNQMVDLGVEIDCASVVSVLPACGHLKELE 175

Query: 391 HGKCVHGWVTRHKLESDVIVETSLIDLYAKC 483
            G+ VH  V    L + +    +LID+YAKC
Sbjct: 176 MGRRVHATVEDKDLGNKIAARNALIDMYAKC 206


>ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39350 gi|10177683|dbj|BAB11009.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332007040|gb|AED94423.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  203 bits (517), Expect = 1e-50
 Identities = 93/166 (56%), Positives = 126/166 (75%)
 Frame = +1

Query: 1   DRMMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKC 180
           D M+ + V LD AT+VS+LP C  LKDL+ GR VH+LVE+KRLG+ I V+N++VNMY KC
Sbjct: 207 DWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKC 266

Query: 181 GCVYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALL 360
           G + EAR +FD+M  RDV++WT M+ GY  +GD  +AL LC  MQ EG+RPN+VT+A+L+
Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV 326

Query: 361 SACISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVEL 498
           S C  +  +N GKC+HGW  R ++ SD+I+ETSLI +YAKC RV+L
Sbjct: 327 SVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372



 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
 Frame = +1

Query: 4   RMMGDGVGL--DRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGK 177
           RM+ +GV    D  T   V  A   LK ++ G +VH  + +   G    V+N+++ MY  
Sbjct: 105 RMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMN 164

Query: 178 CGCVYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAAL 357
            G V  AR +FD M  RDV+SW  M+ GY  NG    AL +   M  E +  +  T+ ++
Sbjct: 165 FGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSM 224

Query: 358 LSACISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVE 495
           L  C    DL  G+ VH  V   +L   + V+ +L+++Y KC R++
Sbjct: 225 LPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
 Frame = +1

Query: 4   RMMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCG 183
           RM  + V  + AT+ S+LPA A+L DL++   +H  + +    +S+     +V++Y KCG
Sbjct: 410 RMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469

Query: 184 CVYEARLIFDQMIER----DVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVA 351
            +  A  IF+ + E+    DVV W A++ GY ++GD  +AL + + M   G+ PN +T  
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFT 529

Query: 352 ALLSACISSSDLNHGKCVHGWVTRH-KLESDVIVETSLIDLYAKCNRVE 495
           + L+AC  S  +  G  +  ++  H K  +     T ++DL  +  R++
Sbjct: 530 SALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLD 578



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/163 (26%), Positives = 80/163 (49%)
 Frame = +1

Query: 7   MMGDGVGLDRATVVSVLPACASLKDLQRGRLVHELVEQKRLGNSIAVRNSMVNMYGKCGC 186
           M  +GV  +  T+ S++  C     +  G+ +H    ++++ + I +  S+++MY KC  
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369

Query: 187 VYEARLIFDQMIERDVVSWTAMMGGYVLNGDARSALALCLPMQLEGIRPNSVTVAALLSA 366
           V     +F    +     W+A++ G V N     AL L   M+ E + PN  T+ +LL A
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429

Query: 367 CISSSDLNHGKCVHGWVTRHKLESDVIVETSLIDLYAKCNRVE 495
             + +DL     +H ++T+    S +   T L+ +Y+KC  +E
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLE 472