BLASTX nr result

ID: Cimicifuga21_contig00034402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034402
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278446.1| PREDICTED: uncharacterized protein LOC100241...    97   1e-18
ref|XP_002511891.1| hypothetical protein RCOM_1616170 [Ricinus c...    86   4e-15
ref|XP_002320812.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002302596.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|NP_001136684.1| uncharacterized protein LOC100216815 [Zea ma...    65   6e-09

>ref|XP_002278446.1| PREDICTED: uncharacterized protein LOC100241428 [Vitis vinifera]
           gi|297745355|emb|CBI40435.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
 Frame = -1

Query: 314 CMKTDGKGWYCKEEAQEGESLCEHHLKQLKSYHGKYNYSTRKSFKAKPRVGNAQASTAVP 135
           C K+DGKGW C++ A+EG +LCEHHL QL+SY+     S+RK  K   R          P
Sbjct: 132 CNKSDGKGWQCRKAAKEGHALCEHHLAQLRSYNSSNQSSSRKLDKPADR----------P 181

Query: 134 GKRKKNRG-KVQTTSPADFYYYCGFGPSWGRKRGG-------NEIKKE 15
             R++ RG K   ++P ++YYY GFGP WG+KRGG       NE+K E
Sbjct: 182 SVRRRGRGLKKPPSNPNEYYYYSGFGPLWGKKRGGSKPESNRNELKTE 229


>ref|XP_002511891.1| hypothetical protein RCOM_1616170 [Ricinus communis]
           gi|223549071|gb|EEF50560.1| hypothetical protein
           RCOM_1616170 [Ricinus communis]
          Length = 311

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
 Frame = -1

Query: 317 CCMKTDGKGWYCKEEAQEGESLCEHHLKQLKSYHGKYNYSTRKSFKAKPRVGNA--QAST 144
           CC K DGK W+CK E +EG S+C+HH+  L S    YN +   +  A P    +  +   
Sbjct: 137 CCNKIDGKEWHCKNELKEGHSMCDHHI--LSSLKSSYNNNVTSACIASPTNSPSIKKPEK 194

Query: 143 AVPGKRK-----KNRGKVQTTSPADFYYYCGFGPSWGRKRG----GNEIKKEQLEV 3
           AV G R+       +G+  +++P +FYYY GFGP WG++RG    GN+ + ++ E+
Sbjct: 195 AVAGTRRGRGKGAKKGQSSSSNPYEFYYYSGFGPLWGKRRGDRGEGNKNESKESEI 250


>ref|XP_002320812.1| predicted protein [Populus trichocarpa] gi|222861585|gb|EEE99127.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
 Frame = -1

Query: 314 CMKTDGKGWYCKEEAQEGESLCE--HHLKQLKSYHGKYNYSTRKSFKAKPRVGNAQASTA 141
           C KTDGKGW+CK + + G ++C+  HHL   KS +   N +   S   K     A    A
Sbjct: 133 CNKTDGKGWHCKNDTKNGHTVCDHHHHLTSHKSSYSNINNNINGSAATKKPDKVASIIGA 192

Query: 140 VPGKRKK-NRGKVQTTSPADFYYYCGFGPSWGRKRGGNE 27
             G+ K   +G   +++P +FYYY GFGP WG++RG  +
Sbjct: 193 RRGRAKSAKKGSSSSSNPYEFYYYSGFGPLWGKRRGDKD 231


>ref|XP_002302596.1| predicted protein [Populus trichocarpa] gi|222844322|gb|EEE81869.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
 Frame = -1

Query: 314 CMKTDGKGWYCKEEAQEGESLCEHH-----LKQLKSYHGKYNYSTRKSFKAKPRVGNAQA 150
           C KTDGKGW+CK E + G  +C+HH     LK     +G  N S   +   KP  G    
Sbjct: 132 CNKTDGKGWHCKNETRNGLPMCDHHHHLTSLKSSSCNNGNINGSAIAT--KKPDKGTCIT 189

Query: 149 STAVPGKRKKNRGKVQTTSPADFYYYCGFGPSWGRKRGGNE 27
                  +   +G    ++P +FYYY GFGP WG++RG  +
Sbjct: 190 GARRGRAKSAKKGSSSNSNPYEFYYYSGFGPLWGKRRGDRD 230


>ref|NP_001136684.1| uncharacterized protein LOC100216815 [Zea mays]
           gi|194696630|gb|ACF82399.1| unknown [Zea mays]
           gi|413934124|gb|AFW68675.1| hypothetical protein
           ZEAMMB73_367579 [Zea mays]
          Length = 344

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
 Frame = -1

Query: 314 CMKTDGKGWYCKEEAQEGESLCEHHLKQLKSYHGKYNYSTRKSFKAKPRVGNAQASTAVP 135
           C K DGKGW C+  A    SLCE+HL + +SY    + S  +  KA      A A T+  
Sbjct: 170 CKKNDGKGWNCRHNASHPNSLCEYHLMKKRSYLNLQHASPAEEDKAM-----AAAPTSAA 224

Query: 134 GKRKKNRGKVQTTSPAD------FYYYCGFGPSWGRKRGGNEIKKEQ 12
            K   +    +T  P +      FYYY GF PS G++R  N  K ++
Sbjct: 225 SKPSSSSNTQKTKLPNNYDANEGFYYYHGFRPSRGKRRCRNHPKNDE 271


Top