BLASTX nr result

ID: Cimicifuga21_contig00034397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034397
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79410.1| hypothetical protein VITISV_038452 [Vitis vinifera]    45   2e-06
emb|CAN72837.1| hypothetical protein VITISV_031500 [Vitis vinifera]    50   2e-06
emb|CAN64017.1| hypothetical protein VITISV_031525 [Vitis vinifera]    45   3e-06
emb|CAN74944.1| hypothetical protein VITISV_000894 [Vitis vinifera]    50   4e-06
emb|CAN83427.1| hypothetical protein VITISV_009103 [Vitis vinifera]    50   4e-06

>emb|CAN79410.1| hypothetical protein VITISV_038452 [Vitis vinifera]
          Length = 256

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = -1

Query: 344 GGIGYNYVSLTNEALFGKWL*RYGEEEKSLWHNVILAKYG 225
           GG+G   +S  N+AL GKW  R+  E+ SLW  VI+ K+G
Sbjct: 30  GGLGIRNLSRLNKALLGKWCWRFASEQDSLWKQVIVRKFG 69



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -2

Query: 211 WDIKLPRNS*GVTLSRGIVDGRSKFTKSVVFHLGGGEFISLWHDIRC 71
           W     R S G+ L + I +G  +F+K V F +G G  +  W D  C
Sbjct: 75  WCSGASRESHGMGLWKAIRNGWMEFSKRVAFKVGDGRRVRFWKDRWC 121


>emb|CAN72837.1| hypothetical protein VITISV_031500 [Vitis vinifera]
          Length = 982

 Score = 50.1 bits (118), Expect(2) = 2e-06
 Identities = 22/40 (55%), Positives = 26/40 (65%)
 Frame = -1

Query: 344 GGIGYNYVSLTNEALFGKWL*RYGEEEKSLWHNVILAKYG 225
           GG+G   + L N AL GKWL R+  E  SLWH VIL+ YG
Sbjct: 610 GGLGIGKIPLRNRALLGKWLWRFPRESTSLWHQVILSIYG 649



 Score = 26.2 bits (56), Expect(2) = 2e-06
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 166 RGIVDGRSKFTKSVVFHLGGGEFISLWHDI 77
           + I  G   F+K   F +G GE I  W D+
Sbjct: 670 KAIAQGFQDFSKYTRFXVGDGERIRFWEDL 699


>emb|CAN64017.1| hypothetical protein VITISV_031525 [Vitis vinifera]
          Length = 1355

 Score = 45.1 bits (105), Expect(2) = 3e-06
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = -1

Query: 344  GGIGYNYVSLTNEALFGKWL*RYGEEEKSLWHNVILAKYG 225
            GG+G   +S  N+AL GKW  R+  E+ SLW  VI+ K+G
Sbjct: 1129 GGLGIRNLSRLNKALLGKWCWRFASEQDSLWKQVIVRKFG 1168



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 220  DNKWDIKLPRNS*GVTLSRGIVDGRSKFTKSVVFHLGGGEFISLWHDIRC 71
            D +W     R S GV L + I +   +F+K V F +G G+ +  W D  C
Sbjct: 1171 DGRWCSGDSRESHGVGLWKVIRNRWMEFSKRVAFKVGDGKRVRFWKDRWC 1220


>emb|CAN74944.1| hypothetical protein VITISV_000894 [Vitis vinifera]
          Length = 1675

 Score = 50.1 bits (118), Expect(2) = 4e-06
 Identities = 22/40 (55%), Positives = 26/40 (65%)
 Frame = -1

Query: 344  GGIGYNYVSLTNEALFGKWL*RYGEEEKSLWHNVILAKYG 225
            GG+G   + L N AL GKWL R+  E  SLWH VIL+ YG
Sbjct: 1372 GGLGIGKIPLRNRALLGKWLWRFPRESTSLWHQVILSIYG 1411



 Score = 25.4 bits (54), Expect(2) = 4e-06
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 166  RGIVDGRSKFTKSVVFHLGGGEFISLWHDI 77
            + I  G   F+K   F +G GE I  W D+
Sbjct: 1432 KAIAQGFQDFSKYTRFIVGDGERIRFWEDL 1461


>emb|CAN83427.1| hypothetical protein VITISV_009103 [Vitis vinifera]
          Length = 891

 Score = 50.1 bits (118), Expect(2) = 4e-06
 Identities = 22/40 (55%), Positives = 26/40 (65%)
 Frame = -1

Query: 344 GGIGYNYVSLTNEALFGKWL*RYGEEEKSLWHNVILAKYG 225
           GG+G   + L N AL GKWL R+  E  SLWH VIL+ YG
Sbjct: 552 GGLGIGKIPLRNRALLGKWLWRFPRESTSLWHQVILSIYG 591



 Score = 25.4 bits (54), Expect(2) = 4e-06
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 166 RGIVDGRSKFTKSVVFHLGGGEFISLWHDI 77
           + I  G   F+K   F +G GE I  W D+
Sbjct: 612 KAIAQGFQDFSKYTRFIVGDGERIRFWEDL 641


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