BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034389
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524637.1| PREDICTED: general transcription factor IIF ...    72   5e-11
emb|CBI31490.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002274802.1| PREDICTED: general transcription factor IIF ...    70   2e-10
ref|XP_002534300.1| Transcription initiation factor IIF subunit ...    63   3e-08
emb|CAN81117.1| hypothetical protein VITISV_005903 [Vitis vinifera]    60   1e-07

>ref|XP_003524637.1| PREDICTED: general transcription factor IIF subunit 2-like [Glycine
           max]
          Length = 252

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
 Frame = -3

Query: 226 VETSRAEKPVYLLKCPPVVSRTFRSXXXXXXXXNATFSTEXXXXXSRPVAKVIVSIDPLN 47
           V+TS+AE+ V+L+KCPP+VSR+ R+                     RPVAKV+VSIDPLN
Sbjct: 11  VDTSKAERAVWLMKCPPLVSRSLRAPPSDPS---------------RPVAKVVVSIDPLN 55

Query: 46  SSEDSS-PQFTMELAG 2
           S++D S PQFTMELAG
Sbjct: 56  SNDDDSPPQFTMELAG 71


>emb|CBI31490.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
 Frame = -3

Query: 226 VETSRAEKPVYLLKCPPVVSRTFRSXXXXXXXXNATFSTEXXXXXSRPVAKVIVSIDPL- 50
           V+TSR+E+ V+L+KCPPVVSR              + S+       RPVAKVIVS+DPL 
Sbjct: 54  VDTSRSERAVWLMKCPPVVSR--------------SLSSSSASDSLRPVAKVIVSLDPLL 99

Query: 49  -NSSEDSSPQFTMELAG 2
            N  +DS PQFTMELAG
Sbjct: 100 ANDDDDSPPQFTMELAG 116


>ref|XP_002274802.1| PREDICTED: general transcription factor IIF subunit 2 [Vitis
           vinifera]
          Length = 257

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
 Frame = -3

Query: 226 VETSRAEKPVYLLKCPPVVSRTFRSXXXXXXXXNATFSTEXXXXXSRPVAKVIVSIDPL- 50
           V+TSR+E+ V+L+KCPPVVSR              + S+       RPVAKVIVS+DPL 
Sbjct: 11  VDTSRSERAVWLMKCPPVVSR--------------SLSSSSASDSLRPVAKVIVSLDPLL 56

Query: 49  -NSSEDSSPQFTMELAG 2
            N  +DS PQFTMELAG
Sbjct: 57  ANDDDDSPPQFTMELAG 73


>ref|XP_002534300.1| Transcription initiation factor IIF subunit beta, putative [Ricinus
           communis] gi|223525544|gb|EEF28082.1| Transcription
           initiation factor IIF subunit beta, putative [Ricinus
           communis]
          Length = 278

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -3

Query: 226 VETSRAEKPVYLLKCPPVVSRTFRSXXXXXXXXNATFSTEXXXXXSRPVAKVIVSIDPLN 47
           +ET+RAEK V+L+KCP +VS + +              +      SRP+AKVI+SI+PLN
Sbjct: 31  LETARAEKAVWLMKCPALVSNSLKKNP-----------SSPDNDPSRPIAKVILSINPLN 79

Query: 46  SSED-SSPQFTMELAG 2
           S++D SS QFTMELAG
Sbjct: 80  SNDDNSSRQFTMELAG 95


>emb|CAN81117.1| hypothetical protein VITISV_005903 [Vitis vinifera]
          Length = 584

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 16/91 (17%)
 Frame = -3

Query: 226 VETSRAEKPVYLLKCPPVVSRTFRSXXXXXXXXNATFSTEXXXXXSRPVAKVIVSIDPL- 50
           V+TSR+E+ V+L+KCPPVVSR              + S+       RPVAKVIVS+DPL 
Sbjct: 11  VDTSRSERAVWLMKCPPVVSR--------------SLSSSSASDSLRPVAKVIVSLDPLL 56

Query: 49  -NSSEDSSPQ--------------FTMELAG 2
            N  +DS PQ              FTMELAG
Sbjct: 57  ANDDDDSPPQGFMIAHEHAFDYELFTMELAG 87