BLASTX nr result

ID: Cimicifuga21_contig00034371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034371
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517149.1| transporter, putative [Ricinus communis] gi|...   238   4e-61
ref|XP_002282170.1| PREDICTED: uncharacterized protein LOC100247...   236   2e-60
emb|CAN68227.1| hypothetical protein VITISV_040534 [Vitis vinifera]   232   2e-59
ref|XP_002312528.1| predicted protein [Populus trichocarpa] gi|2...   230   9e-59
ref|XP_002314701.1| predicted protein [Populus trichocarpa] gi|2...   227   8e-58

>ref|XP_002517149.1| transporter, putative [Ricinus communis]
           gi|223543784|gb|EEF45312.1| transporter, putative
           [Ricinus communis]
          Length = 434

 Score =  238 bits (607), Expect = 4e-61
 Identities = 123/187 (65%), Positives = 143/187 (76%), Gaps = 7/187 (3%)
 Frame = +2

Query: 2   AASLRFDPSSIPSTAKIGPXXXXXXXXXXXHNFDSLKPWYLSLTDTSASKVGPNIVPSPS 181
           A+SLRFD SS+ STAKIG            H+FDSLKPW+L+LTDTS+SKVG     SP+
Sbjct: 234 ASSLRFDTSSVKSTAKIGSCSSSRFSFTVSHHFDSLKPWHLTLTDTSSSKVGSATTTSPA 293

Query: 182 LMGSAMISPINARSYSFASPATRTPRGSVN---YRNGPTKKSNLCPSTPLPQKVSTMN-- 346
           L+G A ISP+NARSYSFASPA RTP GS+N   Y   P+KK+ L PSTPLPQ+V+     
Sbjct: 294 LLGPAKISPLNARSYSFASPAARTPLGSINGDSYSCRPSKKT-LFPSTPLPQRVTASEPI 352

Query: 347 --DFPRTPRPSFLQSPALFFKRDCQVSRTDKTRESFLPFLRFYRMPYDEMYYRSKMRPPL 520
              +PRTPRPSFLQSPALFFK++C V R DK+RESFLPFL+FYR PYDEM YRSKMRPPL
Sbjct: 353 KISYPRTPRPSFLQSPALFFKKECHVMRADKSRESFLPFLKFYRRPYDEMIYRSKMRPPL 412

Query: 521 GGLVSIV 541
           GGL+SIV
Sbjct: 413 GGLISIV 419


>ref|XP_002282170.1| PREDICTED: uncharacterized protein LOC100247799 [Vitis vinifera]
           gi|297737041|emb|CBI26242.3| unnamed protein product
           [Vitis vinifera]
          Length = 423

 Score =  236 bits (602), Expect = 2e-60
 Identities = 126/188 (67%), Positives = 143/188 (76%), Gaps = 8/188 (4%)
 Frame = +2

Query: 2   AASLRFDPSSIPSTAKIGPXXXXXXXXXXXHNFDSLKPWYLSLTDTSASKVGPNIVPSPS 181
           A+SLRFDPSSIPSTAKIG            H+FDSLKPWYLSL DTS SKVGP   PSPS
Sbjct: 223 ASSLRFDPSSIPSTAKIGSCSSSRFSFTVSHHFDSLKPWYLSLADTSGSKVGPTS-PSPS 281

Query: 182 LMGSAMISPINARSYSFASPATRTPRGSV--NYRNGPTKKSNLCPSTPLPQKVST-MND- 349
           ++G A+ISP+NARS SFASPA RTPRG +     + P KKS L  STPLP++ +   ND 
Sbjct: 282 MLGPALISPLNARSLSFASPAARTPRGGIYGGSASRPAKKS-LFASTPLPERTNYGKNDA 340

Query: 350 ----FPRTPRPSFLQSPALFFKRDCQVSRTDKTRESFLPFLRFYRMPYDEMYYRSKMRPP 517
                PRTPRPSFLQSPALFF+++C VSR DK+RESFLPFL+FYR PYDEM YRSKMRPP
Sbjct: 341 MSINHPRTPRPSFLQSPALFFRKECHVSRADKSRESFLPFLKFYRRPYDEMIYRSKMRPP 400

Query: 518 LGGLVSIV 541
           LGGL+SIV
Sbjct: 401 LGGLISIV 408


>emb|CAN68227.1| hypothetical protein VITISV_040534 [Vitis vinifera]
          Length = 465

 Score =  232 bits (592), Expect = 2e-59
 Identities = 125/188 (66%), Positives = 142/188 (75%), Gaps = 8/188 (4%)
 Frame = +2

Query: 2   AASLRFDPSSIPSTAKIGPXXXXXXXXXXXHNFDSLKPWYLSLTDTSASKVGPNIVPSPS 181
           A+SLRFDPSSIPSTAKIG            H+FDSLKPWYLSL DTS SKVGP   PSPS
Sbjct: 265 ASSLRFDPSSIPSTAKIGSCSSSRFSFTVSHHFDSLKPWYLSLADTSGSKVGPTS-PSPS 323

Query: 182 LMGSAMISPINARSYSFASPATRTPRGSV--NYRNGPTKKSNLCPSTPLPQKVST-MND- 349
           ++G A+ISP+NARS SFASPA RTPRG +     + P KKS L  STPL ++ +   ND 
Sbjct: 324 MLGPALISPLNARSLSFASPAARTPRGGIYGGSASRPAKKS-LFASTPLLERTNYGKNDA 382

Query: 350 ----FPRTPRPSFLQSPALFFKRDCQVSRTDKTRESFLPFLRFYRMPYDEMYYRSKMRPP 517
                PRTPRPSFLQSPALFF+++C VSR DK+RESFLPFL+FYR PYDEM YRSKMRPP
Sbjct: 383 MSINHPRTPRPSFLQSPALFFRKECHVSRADKSRESFLPFLKFYRRPYDEMIYRSKMRPP 442

Query: 518 LGGLVSIV 541
           LGGL+SIV
Sbjct: 443 LGGLISIV 450


>ref|XP_002312528.1| predicted protein [Populus trichocarpa] gi|222852348|gb|EEE89895.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  230 bits (587), Expect = 9e-59
 Identities = 121/186 (65%), Positives = 142/186 (76%), Gaps = 6/186 (3%)
 Frame = +2

Query: 2   AASLRFDPSSIPSTAKIGPXXXXXXXXXXXHNFDSLKPWYLSLTDTSASKVGPNIVPSPS 181
           A+SLRFDPSSI STAKIG            H+FDSLKPW+LSLTDTS+SKVGP    S S
Sbjct: 233 ASSLRFDPSSINSTAKIGSCSSSRFSFTVSHHFDSLKPWHLSLTDTSSSKVGPT---SLS 289

Query: 182 LMGSAMISPINARSYSFASPATRTPRGSVN--YRNGPTKKSNLCPSTPLPQKVSTMN--- 346
            +G A++SP+NARSYSFASP  R PRGS+N      PT+KS L PSTPLPQ+V+  +   
Sbjct: 290 HLGPALVSPLNARSYSFASPVARAPRGSINGCSYTRPTRKS-LFPSTPLPQRVTEGDPIK 348

Query: 347 -DFPRTPRPSFLQSPALFFKRDCQVSRTDKTRESFLPFLRFYRMPYDEMYYRSKMRPPLG 523
              PRTPRPSFLQSPALFFK++C VS+ D++RESF+PF +FYR PYDEM YRSKMRPPLG
Sbjct: 349 ISLPRTPRPSFLQSPALFFKKECHVSKADRSRESFVPFFKFYRRPYDEMIYRSKMRPPLG 408

Query: 524 GLVSIV 541
           GL+SIV
Sbjct: 409 GLISIV 414


>ref|XP_002314701.1| predicted protein [Populus trichocarpa] gi|222863741|gb|EEF00872.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  227 bits (579), Expect = 8e-58
 Identities = 117/185 (63%), Positives = 142/185 (76%), Gaps = 5/185 (2%)
 Frame = +2

Query: 2   AASLRFDPSSIPSTAKIGPXXXXXXXXXXXHNFDSLKPWYLSLTDTSASKVGPNIVPSPS 181
           A+SLR DPSS+ STAKIG            H+FDSLKPW+L+LTDTSASKVGP  + S  
Sbjct: 231 ASSLRLDPSSVKSTAKIGSCSSSRFSFTVSHHFDSLKPWHLTLTDTSASKVGPTNLSS-- 288

Query: 182 LMGSAMISPINARSYSFASPATRTPRGSVNYRNGPT-KKSNLCPSTPLPQKVSTMNDF-- 352
            +G A+ISP+NARS+SFASP  RTPRGS+N  +     + +L PSTPLPQ+V+T +    
Sbjct: 289 -LGPALISPLNARSFSFASPVARTPRGSMNGGSYTRLAQKSLFPSTPLPQRVTTSDTLKI 347

Query: 353 --PRTPRPSFLQSPALFFKRDCQVSRTDKTRESFLPFLRFYRMPYDEMYYRSKMRPPLGG 526
             PRTPRPSFLQSPALFFK++C VS+ D++RESF+PFL+FYR PYDEM YRSKMRPPLGG
Sbjct: 348 SQPRTPRPSFLQSPALFFKKECHVSKADRSRESFVPFLKFYRRPYDEMIYRSKMRPPLGG 407

Query: 527 LVSIV 541
           L+SIV
Sbjct: 408 LISIV 412


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