BLASTX nr result

ID: Cimicifuga21_contig00034365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034365
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302370.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002307335.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_003602894.1| DsRNA-binding protein [Medicago truncatula] ...    59   5e-07
ref|XP_002514055.1| conserved hypothetical protein [Ricinus comm...    58   9e-07
ref|XP_002514052.1| conserved hypothetical protein [Ricinus comm...    58   9e-07

>ref|XP_002302370.1| predicted protein [Populus trichocarpa] gi|222844096|gb|EEE81643.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
 Frame = -1

Query: 202 TLKEGPVHHPCFRSTVIVSNAGYDSLIGFYNRKTTEHSAV-VAFLKFANRG 53
           T+KEGP H P FRSTVIV +  YDSL GF+NRK  E SA  VA ++ A  G
Sbjct: 36  TIKEGPSHEPSFRSTVIVKDVRYDSLPGFFNRKAAEQSAAEVALVELAKAG 86


>ref|XP_002307335.1| predicted protein [Populus trichocarpa] gi|222856784|gb|EEE94331.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = -1

Query: 202 TLKEGPVHHPCFRSTVIVSNAGYDSLIGFYNRKTTEHSAV-VAFLKFANRG 53
           T+KEGP H P FRSTVIV    YDSL GF+NRK  E SA  VA ++ A  G
Sbjct: 29  TIKEGPSHEPSFRSTVIVKEVRYDSLPGFFNRKAAEQSAAEVALVELAKAG 79


>ref|XP_003602894.1| DsRNA-binding protein [Medicago truncatula]
           gi|355491942|gb|AES73145.1| DsRNA-binding protein
           [Medicago truncatula]
          Length = 780

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
 Frame = -1

Query: 202 TLKEGPVHHPCFRSTVIVSNAGYDSLIGFYNRKTTEHSAV-VAFLKFANRG 53
           T KEGP H P FRSTVI+++  YDSL GF+NRK  E SA  VA ++ A  G
Sbjct: 37  TTKEGPSHEPSFRSTVIMNDVRYDSLAGFFNRKAAEQSAAEVALMELAKTG 87


>ref|XP_002514055.1| conserved hypothetical protein [Ricinus communis]
           gi|223547141|gb|EEF48638.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
 Frame = -1

Query: 202 TLKEGPVHHPCFRSTVIVSNAGYDSLIGFYNRKTTEHSAV-VAFLKFA 62
           T+KEGP H P FRSTVIV++  YDSL GF+NRK  E SA  VA ++ A
Sbjct: 37  TIKEGPSHEPSFRSTVIVNDIRYDSLPGFFNRKAAEQSAAEVALMELA 84


>ref|XP_002514052.1| conserved hypothetical protein [Ricinus communis]
           gi|223547138|gb|EEF48635.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 412

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
 Frame = -1

Query: 202 TLKEGPVHHPCFRSTVIVSNAGYDSLIGFYNRKTTEHSAV-VAFLKFA 62
           T+KEGP H P FRSTVIV++  YDSL GF NRK  E SAV VA ++ A
Sbjct: 36  TIKEGPSHEPSFRSTVIVNDIRYDSLPGFLNRKAAEQSAVEVALMELA 83


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