BLASTX nr result
ID: Cimicifuga21_contig00034356
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00034356 (335 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275536.2| PREDICTED: uncharacterized protein LOC100245... 111 5e-23 emb|CAN79396.1| hypothetical protein VITISV_010431 [Vitis vinifera] 111 5e-23 emb|CBI40035.3| unnamed protein product [Vitis vinifera] 87 1e-15 ref|NP_568451.7| uncharacterized protein [Arabidopsis thaliana] ... 76 2e-12 emb|CAC08248.1| VPS13-like protein [Arabidopsis thaliana] 76 2e-12 >ref|XP_002275536.2| PREDICTED: uncharacterized protein LOC100245550 [Vitis vinifera] Length = 4054 Score = 111 bits (278), Expect = 5e-23 Identities = 60/115 (52%), Positives = 75/115 (65%), Gaps = 5/115 (4%) Frame = -1 Query: 335 PMYVTVEKTMDAFSGARELCIFVPFLLYNCTGLPITVADLGHEMEG--CTMPPCYQLVEM 162 P Y+TVEK MDAFSGARELCIFVPFLLYNCTG + V+D +EM+G CT+P CY LVE Sbjct: 2944 PTYLTVEKVMDAFSGARELCIFVPFLLYNCTGFSLIVSDSANEMKGNDCTIPSCYTLVER 3003 Query: 161 DQHLDRKHSSILLSSKQDPYATRQSTDNIWNLSSKSH---SMENSNLHSRRGSSR 6 + H+ RK LLSS D T ++ N SSK H + +N + S+R S+ Sbjct: 3004 EVHVGRKDGLSLLSSDMDASTTTPVIASLRNSSSKEHIISTRKNVDTDSQRFQSK 3058 >emb|CAN79396.1| hypothetical protein VITISV_010431 [Vitis vinifera] Length = 2058 Score = 111 bits (278), Expect = 5e-23 Identities = 60/115 (52%), Positives = 75/115 (65%), Gaps = 5/115 (4%) Frame = -1 Query: 335 PMYVTVEKTMDAFSGARELCIFVPFLLYNCTGLPITVADLGHEMEG--CTMPPCYQLVEM 162 P Y+TVEK MDAFSGARELCIFVPFLLYNCTG + V+D +EM+G CT+P CY LVE Sbjct: 1835 PTYLTVEKVMDAFSGARELCIFVPFLLYNCTGFSLIVSDSANEMKGNDCTIPSCYTLVER 1894 Query: 161 DQHLDRKHSSILLSSKQDPYATRQSTDNIWNLSSKSH---SMENSNLHSRRGSSR 6 + H+ RK LLSS D T ++ N SSK H + +N + S+R S+ Sbjct: 1895 EVHVGRKDGLSLLSSDMDASTTTPVIASLRNSSSKEHIISTRKNVDTDSQRFQSK 1949 >emb|CBI40035.3| unnamed protein product [Vitis vinifera] Length = 2796 Score = 87.0 bits (214), Expect = 1e-15 Identities = 41/60 (68%), Positives = 47/60 (78%), Gaps = 2/60 (3%) Frame = -1 Query: 335 PMYVTVEKTMDAFSGARELCIFVPFLLYNCTGLPITVADLGHEMEG--CTMPPCYQLVEM 162 P Y+TVEK MDAFSGARELCIFVPFLLYNCTG + V+D +EM+G CT+P CY L M Sbjct: 1716 PTYLTVEKVMDAFSGARELCIFVPFLLYNCTGFSLIVSDSANEMKGNDCTIPSCYTLACM 1775 >ref|NP_568451.7| uncharacterized protein [Arabidopsis thaliana] gi|332005969|gb|AED93352.1| uncharacterized protein [Arabidopsis thaliana] Length = 3464 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 2/77 (2%) Frame = -1 Query: 332 MYVTVEKTMDAFSGARELCIFVPFLLYNCTGLPITVADLGHEMEG--CTMPPCYQLVEMD 159 +YV+ EKTMDA GARE+ IFVPFLLYNCTG P+ V+D +E +G +P CY L+E Sbjct: 2300 VYVSCEKTMDATCGAREVLIFVPFLLYNCTGTPLIVSDCTNETKGIYSVIPSCYNLIEQH 2359 Query: 158 QHLDRKHSSILLSSKQD 108 RK +L+S++D Sbjct: 2360 FVQSRKVGLGILTSEKD 2376 >emb|CAC08248.1| VPS13-like protein [Arabidopsis thaliana] Length = 3306 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 2/77 (2%) Frame = -1 Query: 332 MYVTVEKTMDAFSGARELCIFVPFLLYNCTGLPITVADLGHEMEG--CTMPPCYQLVEMD 159 +YV+ EKTMDA GARE+ IFVPFLLYNCTG P+ V+D +E +G +P CY L+E Sbjct: 2150 VYVSCEKTMDATCGAREVLIFVPFLLYNCTGTPLIVSDCTNETKGIYSVIPSCYNLIEQH 2209 Query: 158 QHLDRKHSSILLSSKQD 108 RK +L+S++D Sbjct: 2210 FVQSRKVGLGILTSEKD 2226