BLASTX nr result

ID: Cimicifuga21_contig00034338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034338
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261...   110   9e-23
emb|CBI21012.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|2235454...    79   5e-13
ref|XP_003588725.1| Lin-54-like protein [Medicago truncatula] gi...    75   5e-12
ref|XP_002324849.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261127 [Vitis vinifera]
          Length = 1001

 Score =  110 bits (276), Expect = 9e-23
 Identities = 67/140 (47%), Positives = 85/140 (60%), Gaps = 6/140 (4%)
 Frame = +2

Query: 101 FSTMDSPEGNKIVASSSSDSPAVQESPFFNYLRTLSPIKPVKAAAHVAQGFPELNIPTPP 280
           F  +  PE     A+SSS SP VQ+SPF  Y+  LSPIKPVK AAHVAQ FP   + +PP
Sbjct: 28  FPPIPPPETAATTATSSSKSPPVQDSPFSTYVSNLSPIKPVK-AAHVAQEFP--GLCSPP 84

Query: 281 PVFTSPRLNPQSETNFLKRSK------YSQSSNAHTFAAGSDVSQRAVSKLMVGLAPCTQ 442
            VFTSPR+NP  ET+FLKR++       + +      AA S++S  A ++L  GL    +
Sbjct: 85  LVFTSPRINPHHETSFLKRTQCHHVQFSTDNGRGKKVAAVSNISDNANAQLNTGLVAKVE 144

Query: 443 KARDTKGSLQVQPCSPSGSV 502
           K  D K S+Q QPCS SG V
Sbjct: 145 KECDIKDSVQDQPCSSSGCV 164


>emb|CBI21012.3| unnamed protein product [Vitis vinifera]
          Length = 1094

 Score =  110 bits (276), Expect = 9e-23
 Identities = 67/140 (47%), Positives = 85/140 (60%), Gaps = 6/140 (4%)
 Frame = +2

Query: 101 FSTMDSPEGNKIVASSSSDSPAVQESPFFNYLRTLSPIKPVKAAAHVAQGFPELNIPTPP 280
           F  +  PE     A+SSS SP VQ+SPF  Y+  LSPIKPVK AAHVAQ FP   + +PP
Sbjct: 40  FPPIPPPETAATTATSSSKSPPVQDSPFSTYVSNLSPIKPVK-AAHVAQEFP--GLCSPP 96

Query: 281 PVFTSPRLNPQSETNFLKRSK------YSQSSNAHTFAAGSDVSQRAVSKLMVGLAPCTQ 442
            VFTSPR+NP  ET+FLKR++       + +      AA S++S  A ++L  GL    +
Sbjct: 97  LVFTSPRINPHHETSFLKRTQCHHVQFSTDNGRGKKVAAVSNISDNANAQLNTGLVAKVE 156

Query: 443 KARDTKGSLQVQPCSPSGSV 502
           K  D K S+Q QPCS SG V
Sbjct: 157 KECDIKDSVQDQPCSSSGCV 176


>ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|223545491|gb|EEF46996.1| tso1,
           putative [Ricinus communis]
          Length = 873

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 61/147 (41%), Positives = 78/147 (53%), Gaps = 15/147 (10%)
 Frame = +2

Query: 107 TMDSPEGNKIVASSS--SDSPAVQESPFFNYLRTLSPIKPVKAAAHVAQGFPELNIPTPP 280
           T  SP  +   AS+   SDS +VQESPF NY+  LSPIKPVK  AH AQGF  L+  +PP
Sbjct: 9   TSTSPSTSISAASTVVLSDSSSVQESPFLNYINNLSPIKPVK-VAHGAQGFGALS--SPP 65

Query: 281 PVFTSPRLNPQSETNFLKRSKYSQSSNAHTFAAGSDVSQRAV-------------SKLMV 421
            +FTSPR  P+  T+FL+RS+  Q S+A       D  ++ V             S+L+ 
Sbjct: 66  LIFTSPRTLPERGTSFLQRSQLCQISSAE-MPENDDRRKKLVDHSNDFEDSVAHHSRLIT 124

Query: 422 GLAPCTQKARDTKGSLQVQPCSPSGSV 502
                TQK    K S   QP S SG +
Sbjct: 125 D----TQKETFVKNSTLDQPGSSSGCI 147


>ref|XP_003588725.1| Lin-54-like protein [Medicago truncatula]
           gi|355477773|gb|AES58976.1| Lin-54-like protein
           [Medicago truncatula]
          Length = 921

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 61/159 (38%), Positives = 79/159 (49%), Gaps = 28/159 (17%)
 Frame = +2

Query: 110 MDSPEGNKIVASSSS-------------DSPAVQESPFFNYLRTLSPIKPVKAAAHVAQG 250
           MDSPE +KI   SSS             +SP VQESPF  ++ TLSPIKPVK A+H   G
Sbjct: 1   MDSPEASKINNISSSLSTINAATNNPSDESPQVQESPFLRFVNTLSPIKPVK-ASHATHG 59

Query: 251 FPELNIPTPPPVFTSPRLN-PQSETNFLKRSKYSQSSNAHTF----------AAGSDV-- 391
           F  LN  +PP VF SPR++ P  ET + +R + +  S+  T            A SD+  
Sbjct: 60  FLGLN--SPPLVFKSPRISAPHRETQYSERLEGTHLSDTETSQSNIGDNSLGEAHSDLKK 117

Query: 392 --SQRAVSKLMVGLAPCTQKARDTKGSLQVQPCSPSGSV 502
             SQ  + ++ +   P  QK  D K     Q  SP  SV
Sbjct: 118 LNSQLPLPEVFI---PVAQKDFDLKNDANTQSSSPPASV 153


>ref|XP_002324849.1| predicted protein [Populus trichocarpa] gi|222866283|gb|EEF03414.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/85 (50%), Positives = 53/85 (62%)
 Frame = +2

Query: 110 MDSPEGNKIVASSSSDSPAVQESPFFNYLRTLSPIKPVKAAAHVAQGFPELNIPTPPPVF 289
           MDSP+      ++++ S    ESPF NY+  LSPIKPVK A+HVAQG   L I +PP VF
Sbjct: 1   MDSPKTTTTTTATTTISATTTESPFSNYVSRLSPIKPVK-ASHVAQGL--LGINSPPLVF 57

Query: 290 TSPRLNPQSETNFLKRSKYSQSSNA 364
           TSPR     +TNFL+R    Q S A
Sbjct: 58  TSPRTLSDRQTNFLRRFPCPQISGA 82


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