BLASTX nr result

ID: Cimicifuga21_contig00034328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034328
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37049.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002301556.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002320932.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002515172.1| conserved hypothetical protein [Ricinus comm...    59   3e-07

>emb|CBI37049.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/90 (45%), Positives = 55/90 (61%)
 Frame = -2

Query: 271 KISIGIMAEEHMKMRSAARKEDEVAVKNTKKGASGQKVVEENNYKPGMVASFKGKQAEDP 92
           KISIG+M +   K+ S   K+DEVAV N +K  S +      N + G+ A+   KQ E P
Sbjct: 19  KISIGVMIDSLAKIGSEGMKDDEVAVLNAEKATSNRG---RKNKEQGLAAAIISKQNEAP 75

Query: 91  VQKTSPWISTKSFSQKTPTTRTVQFYAKRT 2
           VQ++SPWI+TKSF +K P   TV  Y K+T
Sbjct: 76  VQESSPWINTKSFYKKRPIIETV--YTKQT 103


>ref|XP_002301556.1| predicted protein [Populus trichocarpa] gi|222843282|gb|EEE80829.1|
           predicted protein [Populus trichocarpa]
          Length = 849

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271 KISIGIMAEEHMKMRSAARKEDEVAVKNTKK-GASGQKVVEENNYKPGMVASFKGKQAED 95
           KISIGI+ +   K  S   KE+E AV NT++  +  +  VE  N   G   + KG Q E 
Sbjct: 87  KISIGILIDSTWKKGSGGAKENEAAVPNTERVNSKKESSVEGKNMGKGAFDATKGNQTEA 146

Query: 94  PVQKTSPWISTKSFSQKTPTTRTVQFYAKRT 2
           P Q  SPWI+T+SF QK P +  V  YA  T
Sbjct: 147 PEQVHSPWITTRSFDQKLPASEGV-LYAVET 176


>ref|XP_002320932.1| predicted protein [Populus trichocarpa] gi|222861705|gb|EEE99247.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = -2

Query: 271 KISIGIMAEEHMKMRSAARKEDEVAVKNTKKGASGQK--VVEENNYKPGMVASFKGKQAE 98
           KISIGI+ +   K RS   KEDE AV N ++  S ++  V  +   K  + A+ KGKQ E
Sbjct: 33  KISIGILIDSLPKKRSGGTKEDEAAVPNIERVNSKKESSVESKKKGKGAIDATTKGKQTE 92

Query: 97  DPVQKTSPWISTKSFSQKTPTTRTV 23
            P +  SPW +T+SF QK+P +  V
Sbjct: 93  APGRVPSPWTTTRSFHQKSPISEGV 117


>ref|XP_002515172.1| conserved hypothetical protein [Ricinus communis]
           gi|223545652|gb|EEF47156.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 606

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -2

Query: 271 KISIGIMAEEHMKMRSAARKEDEVAVKNTKKGASGQKVVEENNYK-PGMVASFKGKQAED 95
           KIS+GI  +     RS A K++E+ + N ++    ++   E+  K  G+  + +GK  E 
Sbjct: 23  KISVGITIDSLGTKRSGATKKEEIIISNAERENDNKENSLEDKMKGKGVAEAIEGKHTEA 82

Query: 94  PVQKTSPWISTKSFSQKTPTTRTVQF 17
           P + TSPWI+T+SF Q  PT+ T  F
Sbjct: 83  PEKVTSPWITTRSFYQNPPTSETFVF 108


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