BLASTX nr result

ID: Cimicifuga21_contig00034317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034317
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518019.1| PREDICTED: uncharacterized protein LOC100813...    59   3e-07
ref|XP_002886435.1| hypothetical protein ARALYDRAFT_338073 [Arab...    56   3e-06

>ref|XP_003518019.1| PREDICTED: uncharacterized protein LOC100813369 [Glycine max]
          Length = 488

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = -1

Query: 213 NKKALENIHGYISEFFYDNGLSFNVARSESYFKMCHAMVRYQDPSTFKPPSYHDLRVTLL 34
           NK A +    YI+ FF+ NG+ FNVA+S+S+  M  A+  Y      KPPSYH+LRV LL
Sbjct: 93  NKAARDRAVQYIARFFFRNGIPFNVAKSKSFKLMIEAIGTY--GPHLKPPSYHELRVPLL 150

Query: 33  KKKVK 19
           KK+++
Sbjct: 151 KKELE 155


>ref|XP_002886435.1| hypothetical protein ARALYDRAFT_338073 [Arabidopsis lyrata subsp.
           lyrata] gi|297332276|gb|EFH62694.1| hypothetical protein
           ARALYDRAFT_338073 [Arabidopsis lyrata subsp. lyrata]
          Length = 269

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
 Frame = -1

Query: 285 KGPMDAFL-APIDVMFNP----KAPISAANKKALENIHGYISEFFYDNGLSFNVARSESY 121
           KGP+D F+ +P   + N     K    A +K+  E     I+ FFYD GL+FN A  +S+
Sbjct: 37  KGPLDRFITSPPPNLLNARKERKGIFGACDKELREKTCRGIARFFYDFGLAFNAATLDSF 96

Query: 120 FKMCHAMVRYQDPSTFKPPSYHDLRVTLLKKKV 22
            +M   + +Y      KPP+ H+LRV LLKK+V
Sbjct: 97  KEMLELVGQY--GPGLKPPTMHELRVLLLKKEV 127


Top