BLASTX nr result
ID: Cimicifuga21_contig00034312
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00034312 (577 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|2... 303 2e-80 ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera... 290 2e-76 emb|CBI20904.3| unnamed protein product [Vitis vinifera] 290 2e-76 ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm... 289 3e-76 ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin... 276 1e-72 >ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|222866256|gb|EEF03387.1| predicted protein [Populus trichocarpa] Length = 646 Score = 303 bits (775), Expect = 2e-80 Identities = 151/191 (79%), Positives = 170/191 (89%) Frame = +1 Query: 1 IELLSKPSGDVFNMIAARWTGKHESTVNSQERDQTKRLVYGILYGMGPNTLAEQLQCSSH 180 I+LL+KP GDVFN+IAARWTGK E++V+S ERDQTKR+VYGILYGMG NTLAEQL CSS Sbjct: 408 IKLLTKPHGDVFNLIAARWTGKPEASVSSVERDQTKRMVYGILYGMGANTLAEQLDCSSD 467 Query: 181 EAAEKIRSFKSSFPAVASWLHEAVESCRQKGYIETLMGRKRFLSKIKFGNSKEKGKAQRQ 360 EAAEKI+SFKSSFP VASWLHEAV SCR+KGY+ET+ GRKRFLSKIKFGNS+EK KAQRQ Sbjct: 468 EAAEKIKSFKSSFPGVASWLHEAVASCREKGYVETIKGRKRFLSKIKFGNSEEKSKAQRQ 527 Query: 361 AVNSICQGSAADIIKIAMINIHSVIVKGCEKYDSTTKDGIKFSMLKGHCRLLLQVHDELV 540 AVNSICQGSAAD+IKIAMINIHS+IV G + +S++ KF MLKG CR+LLQVHDELV Sbjct: 528 AVNSICQGSAADLIKIAMINIHSLIVDGVGRPESSSLHANKFHMLKGQCRILLQVHDELV 587 Query: 541 LEVDPSLIREA 573 LEVDPSLI EA Sbjct: 588 LEVDPSLINEA 598 >ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis vinifera] Length = 2181 Score = 290 bits (741), Expect = 2e-76 Identities = 146/191 (76%), Positives = 166/191 (86%) Frame = +1 Query: 4 ELLSKPSGDVFNMIAARWTGKHESTVNSQERDQTKRLVYGILYGMGPNTLAEQLQCSSHE 183 ELLSKP GDVF MIAA+WTGK ES V QER+QTKRLVYGILYGMG NTLA+QL+CS E Sbjct: 1942 ELLSKPHGDVFTMIAAKWTGKPESVVGYQEREQTKRLVYGILYGMGANTLAKQLECSLGE 2001 Query: 184 AAEKIRSFKSSFPAVASWLHEAVESCRQKGYIETLMGRKRFLSKIKFGNSKEKGKAQRQA 363 A EKIRSF+SSFP VASWLHEAV C +KGY++TL GRKRFLSKIKFG SKEK KA+RQA Sbjct: 2002 AEEKIRSFRSSFPGVASWLHEAVACCCKKGYVKTLKGRKRFLSKIKFGTSKEKLKARRQA 2061 Query: 364 VNSICQGSAADIIKIAMINIHSVIVKGCEKYDSTTKDGIKFSMLKGHCRLLLQVHDELVL 543 VNSICQGSAADIIKIAMINIHSVI +G ++ +S+T+ KF MLKG CR++LQVHDELVL Sbjct: 2062 VNSICQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVL 2121 Query: 544 EVDPSLIREAG 576 EVDPS+++EAG Sbjct: 2122 EVDPSVMKEAG 2132 >emb|CBI20904.3| unnamed protein product [Vitis vinifera] Length = 2091 Score = 290 bits (741), Expect = 2e-76 Identities = 146/191 (76%), Positives = 166/191 (86%) Frame = +1 Query: 4 ELLSKPSGDVFNMIAARWTGKHESTVNSQERDQTKRLVYGILYGMGPNTLAEQLQCSSHE 183 ELLSKP GDVF MIAA+WTGK ES V QER+QTKRLVYGILYGMG NTLA+QL+CS E Sbjct: 1852 ELLSKPHGDVFTMIAAKWTGKPESVVGYQEREQTKRLVYGILYGMGANTLAKQLECSLGE 1911 Query: 184 AAEKIRSFKSSFPAVASWLHEAVESCRQKGYIETLMGRKRFLSKIKFGNSKEKGKAQRQA 363 A EKIRSF+SSFP VASWLHEAV C +KGY++TL GRKRFLSKIKFG SKEK KA+RQA Sbjct: 1912 AEEKIRSFRSSFPGVASWLHEAVACCCKKGYVKTLKGRKRFLSKIKFGTSKEKLKARRQA 1971 Query: 364 VNSICQGSAADIIKIAMINIHSVIVKGCEKYDSTTKDGIKFSMLKGHCRLLLQVHDELVL 543 VNSICQGSAADIIKIAMINIHSVI +G ++ +S+T+ KF MLKG CR++LQVHDELVL Sbjct: 1972 VNSICQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVL 2031 Query: 544 EVDPSLIREAG 576 EVDPS+++EAG Sbjct: 2032 EVDPSVMKEAG 2042 >ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis] gi|223544402|gb|EEF45923.1| DNA polymerase theta, putative [Ricinus communis] Length = 2154 Score = 289 bits (739), Expect = 3e-76 Identities = 148/191 (77%), Positives = 164/191 (85%) Frame = +1 Query: 1 IELLSKPSGDVFNMIAARWTGKHESTVNSQERDQTKRLVYGILYGMGPNTLAEQLQCSSH 180 IELLSKP GDVF +IAARWTGK E +V S ERDQTKRLVYGILYGMG NTLA+QL+CSS Sbjct: 1908 IELLSKPHGDVFTIIAARWTGKAEESVASLERDQTKRLVYGILYGMGANTLAQQLECSSD 1967 Query: 181 EAAEKIRSFKSSFPAVASWLHEAVESCRQKGYIETLMGRKRFLSKIKFGNSKEKGKAQRQ 360 EAAEKI+SFKS FP VASWLHEAV SCR+ GY+ETL GRKRFLSKIKFGNSKEK KAQRQ Sbjct: 1968 EAAEKIKSFKSCFPGVASWLHEAVASCRKNGYVETLKGRKRFLSKIKFGNSKEKSKAQRQ 2027 Query: 361 AVNSICQGSAADIIKIAMINIHSVIVKGCEKYDSTTKDGIKFSMLKGHCRLLLQVHDELV 540 AVNSICQGSAAD+IKIAMINI+SVI + + D ++ KF MLKG CR+LLQVHDELV Sbjct: 2028 AVNSICQGSAADLIKIAMINIYSVIAR-VDGPDPSSSLATKFHMLKGRCRILLQVHDELV 2086 Query: 541 LEVDPSLIREA 573 LEVDP +I+EA Sbjct: 2087 LEVDPPVIKEA 2097 >ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max] Length = 2147 Score = 276 bits (707), Expect = 1e-72 Identities = 140/191 (73%), Positives = 161/191 (84%) Frame = +1 Query: 1 IELLSKPSGDVFNMIAARWTGKHESTVNSQERDQTKRLVYGILYGMGPNTLAEQLQCSSH 180 +ELLSKP GDVF MIAARWTG E +V S+ER+QTKR+VYGILYGMG N+LAEQL C+S Sbjct: 1909 VELLSKPDGDVFTMIAARWTGCPEVSVCSKEREQTKRMVYGILYGMGVNSLAEQLDCTSD 1968 Query: 181 EAAEKIRSFKSSFPAVASWLHEAVESCRQKGYIETLMGRKRFLSKIKFGNSKEKGKAQRQ 360 EAAEKI +FKSSFP V+SWL EAV SCR KGY+ETL GRKRFLSKIK+G+S EK KAQRQ Sbjct: 1969 EAAEKIANFKSSFPGVSSWLLEAVASCRSKGYVETLKGRKRFLSKIKYGSSTEKSKAQRQ 2028 Query: 361 AVNSICQGSAADIIKIAMINIHSVIVKGCEKYDSTTKDGIKFSMLKGHCRLLLQVHDELV 540 AVNSICQGSAADIIKIAM+ I+S IV G + DS++ KF MLK CR+LLQVHDEL+ Sbjct: 2029 AVNSICQGSAADIIKIAMLRIYSAIVTGFDSPDSSSSLATKFHMLKDRCRILLQVHDELM 2088 Query: 541 LEVDPSLIREA 573 LEVDPS+I+EA Sbjct: 2089 LEVDPSVIKEA 2099