BLASTX nr result

ID: Cimicifuga21_contig00034312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034312
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|2...   303   2e-80
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   290   2e-76
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              290   2e-76
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...   289   3e-76
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   276   1e-72

>ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|222866256|gb|EEF03387.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  303 bits (775), Expect = 2e-80
 Identities = 151/191 (79%), Positives = 170/191 (89%)
 Frame = +1

Query: 1   IELLSKPSGDVFNMIAARWTGKHESTVNSQERDQTKRLVYGILYGMGPNTLAEQLQCSSH 180
           I+LL+KP GDVFN+IAARWTGK E++V+S ERDQTKR+VYGILYGMG NTLAEQL CSS 
Sbjct: 408 IKLLTKPHGDVFNLIAARWTGKPEASVSSVERDQTKRMVYGILYGMGANTLAEQLDCSSD 467

Query: 181 EAAEKIRSFKSSFPAVASWLHEAVESCRQKGYIETLMGRKRFLSKIKFGNSKEKGKAQRQ 360
           EAAEKI+SFKSSFP VASWLHEAV SCR+KGY+ET+ GRKRFLSKIKFGNS+EK KAQRQ
Sbjct: 468 EAAEKIKSFKSSFPGVASWLHEAVASCREKGYVETIKGRKRFLSKIKFGNSEEKSKAQRQ 527

Query: 361 AVNSICQGSAADIIKIAMINIHSVIVKGCEKYDSTTKDGIKFSMLKGHCRLLLQVHDELV 540
           AVNSICQGSAAD+IKIAMINIHS+IV G  + +S++    KF MLKG CR+LLQVHDELV
Sbjct: 528 AVNSICQGSAADLIKIAMINIHSLIVDGVGRPESSSLHANKFHMLKGQCRILLQVHDELV 587

Query: 541 LEVDPSLIREA 573
           LEVDPSLI EA
Sbjct: 588 LEVDPSLINEA 598


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  290 bits (741), Expect = 2e-76
 Identities = 146/191 (76%), Positives = 166/191 (86%)
 Frame = +1

Query: 4    ELLSKPSGDVFNMIAARWTGKHESTVNSQERDQTKRLVYGILYGMGPNTLAEQLQCSSHE 183
            ELLSKP GDVF MIAA+WTGK ES V  QER+QTKRLVYGILYGMG NTLA+QL+CS  E
Sbjct: 1942 ELLSKPHGDVFTMIAAKWTGKPESVVGYQEREQTKRLVYGILYGMGANTLAKQLECSLGE 2001

Query: 184  AAEKIRSFKSSFPAVASWLHEAVESCRQKGYIETLMGRKRFLSKIKFGNSKEKGKAQRQA 363
            A EKIRSF+SSFP VASWLHEAV  C +KGY++TL GRKRFLSKIKFG SKEK KA+RQA
Sbjct: 2002 AEEKIRSFRSSFPGVASWLHEAVACCCKKGYVKTLKGRKRFLSKIKFGTSKEKLKARRQA 2061

Query: 364  VNSICQGSAADIIKIAMINIHSVIVKGCEKYDSTTKDGIKFSMLKGHCRLLLQVHDELVL 543
            VNSICQGSAADIIKIAMINIHSVI +G ++ +S+T+   KF MLKG CR++LQVHDELVL
Sbjct: 2062 VNSICQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVL 2121

Query: 544  EVDPSLIREAG 576
            EVDPS+++EAG
Sbjct: 2122 EVDPSVMKEAG 2132


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  290 bits (741), Expect = 2e-76
 Identities = 146/191 (76%), Positives = 166/191 (86%)
 Frame = +1

Query: 4    ELLSKPSGDVFNMIAARWTGKHESTVNSQERDQTKRLVYGILYGMGPNTLAEQLQCSSHE 183
            ELLSKP GDVF MIAA+WTGK ES V  QER+QTKRLVYGILYGMG NTLA+QL+CS  E
Sbjct: 1852 ELLSKPHGDVFTMIAAKWTGKPESVVGYQEREQTKRLVYGILYGMGANTLAKQLECSLGE 1911

Query: 184  AAEKIRSFKSSFPAVASWLHEAVESCRQKGYIETLMGRKRFLSKIKFGNSKEKGKAQRQA 363
            A EKIRSF+SSFP VASWLHEAV  C +KGY++TL GRKRFLSKIKFG SKEK KA+RQA
Sbjct: 1912 AEEKIRSFRSSFPGVASWLHEAVACCCKKGYVKTLKGRKRFLSKIKFGTSKEKLKARRQA 1971

Query: 364  VNSICQGSAADIIKIAMINIHSVIVKGCEKYDSTTKDGIKFSMLKGHCRLLLQVHDELVL 543
            VNSICQGSAADIIKIAMINIHSVI +G ++ +S+T+   KF MLKG CR++LQVHDELVL
Sbjct: 1972 VNSICQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVL 2031

Query: 544  EVDPSLIREAG 576
            EVDPS+++EAG
Sbjct: 2032 EVDPSVMKEAG 2042


>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
            gi|223544402|gb|EEF45923.1| DNA polymerase theta,
            putative [Ricinus communis]
          Length = 2154

 Score =  289 bits (739), Expect = 3e-76
 Identities = 148/191 (77%), Positives = 164/191 (85%)
 Frame = +1

Query: 1    IELLSKPSGDVFNMIAARWTGKHESTVNSQERDQTKRLVYGILYGMGPNTLAEQLQCSSH 180
            IELLSKP GDVF +IAARWTGK E +V S ERDQTKRLVYGILYGMG NTLA+QL+CSS 
Sbjct: 1908 IELLSKPHGDVFTIIAARWTGKAEESVASLERDQTKRLVYGILYGMGANTLAQQLECSSD 1967

Query: 181  EAAEKIRSFKSSFPAVASWLHEAVESCRQKGYIETLMGRKRFLSKIKFGNSKEKGKAQRQ 360
            EAAEKI+SFKS FP VASWLHEAV SCR+ GY+ETL GRKRFLSKIKFGNSKEK KAQRQ
Sbjct: 1968 EAAEKIKSFKSCFPGVASWLHEAVASCRKNGYVETLKGRKRFLSKIKFGNSKEKSKAQRQ 2027

Query: 361  AVNSICQGSAADIIKIAMINIHSVIVKGCEKYDSTTKDGIKFSMLKGHCRLLLQVHDELV 540
            AVNSICQGSAAD+IKIAMINI+SVI +  +  D ++    KF MLKG CR+LLQVHDELV
Sbjct: 2028 AVNSICQGSAADLIKIAMINIYSVIAR-VDGPDPSSSLATKFHMLKGRCRILLQVHDELV 2086

Query: 541  LEVDPSLIREA 573
            LEVDP +I+EA
Sbjct: 2087 LEVDPPVIKEA 2097


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  276 bits (707), Expect = 1e-72
 Identities = 140/191 (73%), Positives = 161/191 (84%)
 Frame = +1

Query: 1    IELLSKPSGDVFNMIAARWTGKHESTVNSQERDQTKRLVYGILYGMGPNTLAEQLQCSSH 180
            +ELLSKP GDVF MIAARWTG  E +V S+ER+QTKR+VYGILYGMG N+LAEQL C+S 
Sbjct: 1909 VELLSKPDGDVFTMIAARWTGCPEVSVCSKEREQTKRMVYGILYGMGVNSLAEQLDCTSD 1968

Query: 181  EAAEKIRSFKSSFPAVASWLHEAVESCRQKGYIETLMGRKRFLSKIKFGNSKEKGKAQRQ 360
            EAAEKI +FKSSFP V+SWL EAV SCR KGY+ETL GRKRFLSKIK+G+S EK KAQRQ
Sbjct: 1969 EAAEKIANFKSSFPGVSSWLLEAVASCRSKGYVETLKGRKRFLSKIKYGSSTEKSKAQRQ 2028

Query: 361  AVNSICQGSAADIIKIAMINIHSVIVKGCEKYDSTTKDGIKFSMLKGHCRLLLQVHDELV 540
            AVNSICQGSAADIIKIAM+ I+S IV G +  DS++    KF MLK  CR+LLQVHDEL+
Sbjct: 2029 AVNSICQGSAADIIKIAMLRIYSAIVTGFDSPDSSSSLATKFHMLKDRCRILLQVHDELM 2088

Query: 541  LEVDPSLIREA 573
            LEVDPS+I+EA
Sbjct: 2089 LEVDPSVIKEA 2099


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