BLASTX nr result

ID: Cimicifuga21_contig00034306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034306
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520135.1| voltage-dependent anion-selective channel, p...    56   3e-06
ref|XP_002312708.1| porin/voltage-dependent anion-selective chan...    56   3e-06
ref|XP_003631280.1| PREDICTED: mitochondrial outer membrane prot...    55   4e-06
ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot...    55   4e-06
ref|XP_003543710.1| PREDICTED: outer plastidial membrane protein...    55   6e-06

>ref|XP_002520135.1| voltage-dependent anion-selective channel, putative [Ricinus
           communis] gi|223540627|gb|EEF42190.1| voltage-dependent
           anion-selective channel, putative [Ricinus communis]
          Length = 276

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = -3

Query: 310 SATIQHEWWPKPLFTVSGEVDVMAIGKSAKIGVGLA 203
           SA IQHEW PK LFT+SGEVD  AI KSAKIG+ LA
Sbjct: 238 SALIQHEWRPKSLFTISGEVDTRAIEKSAKIGLALA 273


>ref|XP_002312708.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118484777|gb|ABK94257.1| unknown
           [Populus trichocarpa] gi|222852528|gb|EEE90075.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = -3

Query: 310 SATIQHEWWPKPLFTVSGEVDVMAIGKSAKIGVGLA 203
           SA IQHEW PK LFT+SGEVD  AI KSAKIG+ LA
Sbjct: 238 SALIQHEWRPKSLFTISGEVDTKAIEKSAKIGLALA 273


>ref|XP_003631280.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           isoform 2 [Vitis vinifera]
          Length = 247

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = -3

Query: 310 SATIQHEWWPKPLFTVSGEVDVMAIGKSAKIGVGLA 203
           SA IQHEW PK LFT+SGEVD  A+ KSAKIG+ LA
Sbjct: 209 SALIQHEWRPKSLFTISGEVDARAVEKSAKIGLALA 244


>ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           isoform 1 [Vitis vinifera]
          Length = 276

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = -3

Query: 310 SATIQHEWWPKPLFTVSGEVDVMAIGKSAKIGVGLA 203
           SA IQHEW PK LFT+SGEVD  A+ KSAKIG+ LA
Sbjct: 238 SALIQHEWRPKSLFTISGEVDARAVEKSAKIGLALA 273


>ref|XP_003543710.1| PREDICTED: outer plastidial membrane protein porin-like [Glycine
           max]
          Length = 276

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = -3

Query: 310 SATIQHEWWPKPLFTVSGEVDVMAIGKSAKIGVGLA 203
           +A IQHEW PK  FT+SGEVD  AI KSAK+G+GLA
Sbjct: 238 NALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLGLA 273


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