BLASTX nr result

ID: Cimicifuga21_contig00034296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034296
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326770.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002304380.1| predicted protein [Populus trichocarpa] gi|1...    92   6e-17
ref|XP_004168358.1| PREDICTED: BTB/POZ and MATH domain-containin...    91   1e-16
ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    91   1e-16
ref|XP_004138521.1| PREDICTED: BTB/POZ and MATH domain-containin...    91   1e-16

>ref|XP_002326770.1| predicted protein [Populus trichocarpa] gi|222834092|gb|EEE72569.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
 Frame = -3

Query: 505 YTWKIEKFSGLEEEFYFSEAFTAGSHVWTILVHPKGRGTGLGNSMSLYLSLADSNKLSPG 326
           +TW I+KFS L++E   S+ F  G H WT+LV+PKG  T  G S+S++L+L DS  L  G
Sbjct: 180 FTWSIQKFSALDQESCKSQVFATGGHKWTLLVYPKGNSTFKGKSLSIFLTLEDSETLPSG 239

Query: 325 MEVLVEYRLRVVDQVNEKHRENVFTKNFDXXXXXXXXXXXXXXSDLNR-ATGYLVNDTCI 149
             +  E+ LRV DQ+  KH E     +F                +LN  A G+LVN+T +
Sbjct: 240 RTMYAEFTLRVRDQLFGKHVEKTANCHFSNSINDWGHFNFMSLDELNTLAKGFLVNNTLV 299

Query: 148 LEAEITVL 125
           +EA+I VL
Sbjct: 300 VEAQIHVL 307



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
 Frame = -3

Query: 514 PFKYTWKIEKFSGLEE---EFYFSEAFTAGSHVWTILVHPKGRGTGLGNS-MSLYLSLAD 347
           P  Y +KIE FS L     +   S  F   S+ W + +HP G     G+  +SLYL+ + 
Sbjct: 22  PAHYAFKIENFSLLSNTKVDSVESGDFEVDSYKWRLCLHPNGNKKSNGDGHISLYLAFSK 81

Query: 346 SNKLSPGMEVLVEYRLRVVDQVNEKH----RENVFTKNFDXXXXXXXXXXXXXXSDLN-R 182
           SN    G EV V+++L V +Q+++K+      N   + F               +  N  
Sbjct: 82  SNAPPLGWEVNVDFKLFVYNQIHDKYLTIQNANGRVRRFHGMKTEMGFDQLLPLTLFNDE 141

Query: 181 ATGYLVNDTCILEAEITVL 125
           + GYL++D C   AEI V+
Sbjct: 142 SKGYLIDDCCTFGAEIFVI 160


>ref|XP_002304380.1| predicted protein [Populus trichocarpa] gi|118485977|gb|ABK94833.1|
           unknown [Populus trichocarpa]
           gi|222841812|gb|EEE79359.1| predicted protein [Populus
           trichocarpa]
          Length = 321

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = -3

Query: 505 YTWKIEKFSGLEEEFYFSEAFTAGSHVWTILVHPKGRGTGLGNSMSLYLSLADSNKLSPG 326
           +TWKI+ FS L++E Y S+ F+ G + W +LV+PKG  T  G S+S+YL + D   L  G
Sbjct: 187 FTWKIQNFSALDQESYKSQVFSFGGYKWALLVYPKGNSTEKGKSLSIYLKMEDFETLPCG 246

Query: 325 MEVLVEYRLRVVDQVNEKHRENVFTKNFDXXXXXXXXXXXXXXSDLNR-ATGYLVNDTCI 149
                EY LRV DQ+  KH E     +F                D+N    G+LVNDT  
Sbjct: 247 RTTYAEYMLRVKDQLFGKHIEKKAYSHFSYSIKDWGHLNFMSLDDVNALPKGFLVNDTLA 306

Query: 148 LEAEITVL 125
           +E +I V+
Sbjct: 307 VEVQIHVI 314



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
 Frame = -3

Query: 514 PFKYTWKIEKFSGLEE---EFYFSEAFTAGSHVWTILVHPKGRGTGLGNS-MSLYLSLAD 347
           P  YT+KIE FS L     + + S  F  GS+ W + ++P G     G+  +SLYL+ ++
Sbjct: 29  PAHYTFKIENFSLLANAKIDNFESGDFEVGSYKWRLRLYPNGNKKNNGDGHISLYLAFSN 88

Query: 346 SNKLSPGMEVLVEYRLRVVDQVNEKHRENVFTK----NFDXXXXXXXXXXXXXXSDLN-R 182
           SN L  G EV V +RL V +Q+ +K+    + K     F               +  N  
Sbjct: 89  SNALPFGWEVNVNFRLFVYNQIQDKYLTIQYAKGRVRRFHGMKTELGFDQLIPLTIFNDE 148

Query: 181 ATGYLVNDTCILEAEITVL 125
           + GYL++D CI  AEI V+
Sbjct: 149 SKGYLIDDRCIFGAEIFVI 167


>ref|XP_004168358.1| PREDICTED: BTB/POZ and MATH domain-containing protein 3-like
           [Cucumis sativus]
          Length = 316

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
 Frame = -3

Query: 517 VPFKYTWKIEKFSGLEEEFYFSEAFTAGSHVWTILVHPKGRGTGLGNSMSLYLSLADSNK 338
           V +K+ WKI+ FS L+ E Y S+ F AG   W I V+PKG G+G G+ +S YL LAD   
Sbjct: 178 VTYKHVWKIDNFSKLDAESYESKIFNAGDKKWKIRVYPKGHGSGEGSHLSPYLELADPAA 237

Query: 337 LSPGMEVLVEYRLRVVDQVNEKHRENVFTKNFDXXXXXXXXXXXXXXSDLNRAT-GYLVN 161
           L P  ++  E  LR+ DQ+  KH     +  F                +  +   G+LV 
Sbjct: 238 LHPATKIYAEVTLRLQDQIYSKHHSGKVSYWFSASNPEVGGPRFILLDNFKQPNIGFLVK 297

Query: 160 DTCILEAEITVLG*AS 113
           D  I+EAE+ V+G A+
Sbjct: 298 DAFIVEAEVNVIGVAN 313



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
 Frame = -3

Query: 514 PFKYTWKIEKFSGLEE---EFYFSEAFTAGSHVWTILVHPKGRGTGLGNS-MSLYLSLAD 347
           P  YT KIE FS L +   + + S  F AG + W +++HP G  +  GN  +SLYL +A 
Sbjct: 21  PAHYTVKIESFSLLTKNSVDQFESGEFEAGGYKWKLVLHPHGDKSKNGNDHISLYLEIAG 80

Query: 346 SNKLSPGMEVLVEYRLRVVDQVNEKHRENVFT--------KNFDXXXXXXXXXXXXXXSD 191
           ++ L P  EV V YRL ++DQ    +++N  T        + F                +
Sbjct: 81  TDSLQPSWEVFVVYRLFLLDQ----NKDNYLTVEDGKWKPRRFRGMKKQWGFDKYISLKE 136

Query: 190 LNRAT-GYLVNDTCILEAEITV 128
              ++ GYLV+D C+  AE+ V
Sbjct: 137 FKESSNGYLVDDVCVFGAEVFV 158


>ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cucumis
           sativus]
          Length = 466

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/131 (40%), Positives = 77/131 (58%), Gaps = 2/131 (1%)
 Frame = -3

Query: 514 PFKYTWKIEKFSGLEEEFYFSEAFTAGSHVWTILVHPKGRGTGLGNSMSLYLSLADSNKL 335
           P K+TW+IE FS L  + Y+S++F+ G + W ILV PKG      + +S+YL +ADS  L
Sbjct: 50  PIKFTWRIENFSRLNMKKYYSDSFSVGGYKWRILVFPKGNNV---DHLSMYLDVADSGTL 106

Query: 334 SPGMEVLVEYRLRVVDQVNEKHRENVFTKN-FDXXXXXXXXXXXXXXSDL-NRATGYLVN 161
             G     ++ L VV+QV++K+     TK+ F+              SDL + + GYLVN
Sbjct: 107 PYGWSRYAQFSLAVVNQVHKKYSIRKDTKHQFNARESDWGFTSFMPLSDLYDPSRGYLVN 166

Query: 160 DTCILEAEITV 128
           DTCI+EAE+ V
Sbjct: 167 DTCIVEAEVLV 177


>ref|XP_004138521.1| PREDICTED: BTB/POZ and MATH domain-containing protein 3-like
           [Cucumis sativus]
          Length = 316

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
 Frame = -3

Query: 517 VPFKYTWKIEKFSGLEEEFYFSEAFTAGSHVWTILVHPKGRGTGLGNSMSLYLSLADSNK 338
           V +K+ WKI+ FS L+ E Y S+ F AG   W I V+PKG G+G G+ +S YL LAD   
Sbjct: 178 VTYKHVWKIDNFSKLDAESYESKIFNAGDKKWKIRVYPKGHGSGEGSHLSPYLELADPAA 237

Query: 337 LSPGMEVLVEYRLRVVDQVNEKHRENVFTKNFDXXXXXXXXXXXXXXSDLNRAT-GYLVN 161
           L P  ++  E  LR+ DQ+  KH     +  F                +  +   G+LV 
Sbjct: 238 LHPATKIYAEVTLRLQDQIYSKHHSGKVSYWFSASNPEVGGPRFILLDNFKQPNIGFLVK 297

Query: 160 DTCILEAEITVLG*AS 113
           D  I+EAE++++G A+
Sbjct: 298 DAFIVEAEVSIIGVAN 313



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
 Frame = -3

Query: 514 PFKYTWKIEKFSGLEE---EFYFSEAFTAGSHVWTILVHPKGRGTGLGNS-MSLYLSLAD 347
           P  YT KIE FS L +   + + S  F AG + W +++HP G  +  GN  +SLYL +A 
Sbjct: 21  PAHYTVKIESFSLLTKNSVDQFESGEFEAGGYKWKLVLHPHGDKSKNGNDHISLYLEIAG 80

Query: 346 SNKLSPGMEVLVEYRLRVVDQVNEKHRENVFT--------KNFDXXXXXXXXXXXXXXSD 191
           ++ L P  EV V YRL ++DQ    +++N  T        + F                +
Sbjct: 81  TDSLQPSWEVFVVYRLFLLDQ----NKDNYLTVEDGKWKPRRFRGMKKQWGFDKYISLKE 136

Query: 190 LNRAT-GYLVNDTCILEAEITV 128
              ++ GYLV+D C+  AE+ V
Sbjct: 137 FKESSNGYLVDDVCVFGAEVFV 158


Top