BLASTX nr result

ID: Cimicifuga21_contig00034276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034276
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892352.1| hypothetical protein ARALYDRAFT_887868 [Arab...    58   9e-07
ref|NP_172151.2| uncharacterized protein [Arabidopsis thaliana] ...    57   1e-06
ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247...    56   3e-06

>ref|XP_002892352.1| hypothetical protein ARALYDRAFT_887868 [Arabidopsis lyrata subsp.
           lyrata] gi|297338194|gb|EFH68611.1| hypothetical protein
           ARALYDRAFT_887868 [Arabidopsis lyrata subsp. lyrata]
          Length = 486

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/109 (33%), Positives = 57/109 (52%)
 Frame = +1

Query: 4   CFLACLRSKDDPKPQNHLICDQFFANTREKTDLVSQYNLATLFLSQGYSCDGTTYHTLEF 183
           CFL C R++D+    N L+     AN R++ D  SQ +L+ LFLS+  +     +    F
Sbjct: 31  CFLDCFRARDNRSTSN-LVSHSSLANPRKRQD--SQNDLSALFLSEEKAASSPCHDKERF 87

Query: 184 PFRDTDDDKELKDEAKFVKGRGTGTLLQTPTDVWEASEKSEGSTNHGLS 330
                  DK L+DEA+F+K    GT+ +TP ++ + S+K     + G S
Sbjct: 88  DLDSIHIDKGLRDEARFLK--ACGTIPETPIEIRKGSQKLSSPQHSGSS 134


>ref|NP_172151.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332189899|gb|AEE28020.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 481

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/99 (36%), Positives = 54/99 (54%)
 Frame = +1

Query: 4   CFLACLRSKDDPKPQNHLICDQFFANTREKTDLVSQYNLATLFLSQGYSCDGTTYHTLEF 183
           CFL C R++D+    N L+     AN+R+  D  SQ +L+ LFLS+  S          F
Sbjct: 31  CFLDCFRARDNRSTSN-LVSHSSLANSRKAQD--SQNDLSALFLSEEKSASSPCLDKERF 87

Query: 184 PFRDTDDDKELKDEAKFVKGRGTGTLLQTPTDVWEASEK 300
                  DK L+DEA+F+K    GT+ +TP ++ +AS+K
Sbjct: 88  DLDSIHIDKGLRDEARFLK--ACGTIPETPIEIRKASQK 124


>ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247266 [Vitis vinifera]
           gi|302143518|emb|CBI22079.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
 Frame = +1

Query: 1   GCFLACLRSKDDPKPQNHLICDQFFANTREKTDLVSQYNLATLFLSQGYSCDGTTYHTLE 180
           GCF  C R KDD     H     F + ++    ++SQ  L+ LFL++    D  +     
Sbjct: 21  GCFFGCFRIKDD---HQHRPNASFVSQSKSTETMISQNRLSALFLAEEKE-DSLSKDRKS 76

Query: 181 FPFRDTDD---DKELKDEAKFVKGRGTGTLLQTPTDVWEASEKSEGS 312
             F  ++    DKELKDEA+F+K    GTL++TP ++ +AS + + S
Sbjct: 77  HVFGSSEPENIDKELKDEARFLK--ACGTLVETPAEIRKASRRLKSS 121


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