BLASTX nr result

ID: Cimicifuga21_contig00034263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034263
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48034.1| unknown [Lotus japonicus]                               73   2e-11
gb|AFK42721.1| unknown [Lotus japonicus]                               72   5e-11
gb|ABJ74187.1| chloroplast ribulose-1,5-bisphosphate carboxylase...    71   1e-10
gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK4565...    69   3e-10
gb|AFK33868.1| unknown [Lotus japonicus]                               69   3e-10

>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = -2

Query: 349 VVNELDEAAKAYPTAFIRIIGFDNVRQVQVISFIAHRPPGY 227
           V+ ELDEA KAYP AF+RIIGFDNVRQVQ ISFIAHRP GY
Sbjct: 141 VLKELDEAVKAYPNAFVRIIGFDNVRQVQCISFIAHRPAGY 181


>gb|AFK42721.1| unknown [Lotus japonicus]
          Length = 182

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/41 (80%), Positives = 36/41 (87%)
 Frame = -2

Query: 349 VVNELDEAAKAYPTAFIRIIGFDNVRQVQVISFIAHRPPGY 227
           V+ ELDEA +AYP AF+RIIGFDNVRQVQ ISFIAHRP GY
Sbjct: 142 VLKELDEAVRAYPNAFVRIIGFDNVRQVQCISFIAHRPAGY 182


>gb|ABJ74187.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Artemisia annua]
          Length = 90

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = -2

Query: 349 VVNELDEAAKAYPTAFIRIIGFDNVRQVQVISFIAHRPPGY 227
           V+ EL EA K YP AFIRIIGFDNVRQVQ ISFIAH+PPGY
Sbjct: 50  VMKELQEAKKEYPNAFIRIIGFDNVRQVQCISFIAHKPPGY 90


>gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK45650.1| unknown
           [Lotus japonicus]
          Length = 177

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = -2

Query: 349 VVNELDEAAKAYPTAFIRIIGFDNVRQVQVISFIAHRPPGY 227
           V+ EL+EA KAYP AFIRIIGFDN RQVQ ISFIAHRP GY
Sbjct: 137 VLKELEEAKKAYPNAFIRIIGFDNKRQVQCISFIAHRPEGY 177


>gb|AFK33868.1| unknown [Lotus japonicus]
          Length = 177

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = -2

Query: 349 VVNELDEAAKAYPTAFIRIIGFDNVRQVQVISFIAHRPPGY 227
           V+ EL+EA KAYP AFIRIIGFDN RQVQ ISFIAHRP GY
Sbjct: 137 VLKELEEAKKAYPNAFIRIIGFDNKRQVQCISFIAHRPEGY 177


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