BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034258
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    65   8e-09
sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligas...    63   2e-08
ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    62   5e-08
ref|XP_002467049.1| hypothetical protein SORBIDRAFT_01g018800 [S...    62   5e-08
ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Cucumis sativus] gi|449439503|ref|XP_004137525.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 2 [Cucumis sativus]
           gi|449439505|ref|XP_004137526.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
           sativus] gi|449503086|ref|XP_004161827.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
           sativus] gi|449503089|ref|XP_004161828.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
           sativus] gi|449503091|ref|XP_004161829.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
           sativus]
          Length = 378

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/63 (55%), Positives = 39/63 (61%), Gaps = 9/63 (14%)
 Frame = -3

Query: 377 WLELHNSCPVCRYELPTDDPDYESRPKMALG-----SENPP--DQETGDARY--CDNNSE 225
           WLELHNSCPVCRYELPTDDPDYE R + +       SE+ P  D  TG       D NS+
Sbjct: 254 WLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVGSDPNSD 313

Query: 224 SNS 216
            NS
Sbjct: 314 ENS 316


>sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=RING
           finger protein 1 gi|298155591|gb|ADI58769.1| RING-type
           ubiquitin E3 ligase [Gossypium hirsutum]
          Length = 338

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = -3

Query: 377 WLELHNSCPVCRYELPTDDPDYESRPKMALGSENPPDQETGDARYCDNN 231
           WLELHNSCPVCR+ELPTDDPDYE R + A G+    D +    R   +N
Sbjct: 254 WLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDN 302


>ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Glycine max] gi|356531054|ref|XP_003534093.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 2 [Glycine max]
          Length = 376

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/37 (70%), Positives = 28/37 (75%)
 Frame = -3

Query: 377 WLELHNSCPVCRYELPTDDPDYESRPKMALGSENPPD 267
           WLELHNSCPVCRYELPTDDPDYE R +   G  +  D
Sbjct: 234 WLELHNSCPVCRYELPTDDPDYEQRARRGGGGGSGGD 270


>ref|XP_002467049.1| hypothetical protein SORBIDRAFT_01g018800 [Sorghum bicolor]
           gi|241920903|gb|EER94047.1| hypothetical protein
           SORBIDRAFT_01g018800 [Sorghum bicolor]
          Length = 398

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/43 (62%), Positives = 29/43 (67%)
 Frame = -3

Query: 377 WLELHNSCPVCRYELPTDDPDYESRPKMALGSENPPDQETGDA 249
           WLELHNSCP+CR+ELPTDDPDYE R        NPP    G A
Sbjct: 287 WLELHNSCPICRFELPTDDPDYEGRK-----GSNPPQPAVGIA 324


>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 33/55 (60%)
 Frame = -3

Query: 377 WLELHNSCPVCRYELPTDDPDYESRPKMALGSENPPDQETGDARYCDNNSESNSG 213
           WLELHNSCPVCRYELPTDDPDYE R         P D+    A     +S S SG
Sbjct: 231 WLELHNSCPVCRYELPTDDPDYEQRKGNGNDVVTPRDRRFRIAFQWPFSSGSGSG 285