BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034252
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...   103   2e-20
dbj|BAD44345.1| retrotransposon like protein [Arabidopsis thaliana]   103   2e-20
dbj|BAF00669.1| retrotransposon like protein [Arabidopsis thaliana]   103   2e-20
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   101   6e-20
gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]               100   1e-19

>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/117 (46%), Positives = 76/117 (64%), Gaps = 8/117 (6%)
 Frame = -1

Query: 395 YPANLNVANFVSLKLTSSNYLLWKTQVLSLVESQDLLGFITGDTPTPASEI----DGV-- 234
           + ++LN++  V+LKLT +NYLLWKTQ  S + S  LLGF+TG TP PAS I    D +  
Sbjct: 6   FVSSLNISQVVTLKLTPTNYLLWKTQFESYLSSHLLLGFVTGATPRPASTIIVTKDDIQS 65

Query: 233 --VNPDLAAWTRTDRLVKAWITATIAEEALGTVVGLTTSAEVWKSLSTTYSQDSQAR 69
              N +   WTR D+LVKAWI  +++EEAL  V+GL ++ EVW  L+  +++ S  R
Sbjct: 66  EEANQEFLKWTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTR 122


>dbj|BAD44345.1| retrotransposon like protein [Arabidopsis thaliana]
          Length = 383

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/117 (46%), Positives = 76/117 (64%), Gaps = 8/117 (6%)
 Frame = -1

Query: 395 YPANLNVANFVSLKLTSSNYLLWKTQVLSLVESQDLLGFITGDTPTPASEI----DGV-- 234
           + ++LN++  V+LKLT +NYLLWKTQ  S + S  LLGF+TG TP PAS I    D +  
Sbjct: 6   FVSSLNISQVVTLKLTPTNYLLWKTQFESYLSSHLLLGFVTGATPRPASTIIVTKDDIQS 65

Query: 233 --VNPDLAAWTRTDRLVKAWITATIAEEALGTVVGLTTSAEVWKSLSTTYSQDSQAR 69
              N +   WTR D+LVKAWI  +++EEAL  V+GL ++ EVW  L+  +++ S  R
Sbjct: 66  EEANQEFLKWTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTR 122


>dbj|BAF00669.1| retrotransposon like protein [Arabidopsis thaliana]
          Length = 392

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/117 (46%), Positives = 76/117 (64%), Gaps = 8/117 (6%)
 Frame = -1

Query: 395 YPANLNVANFVSLKLTSSNYLLWKTQVLSLVESQDLLGFITGDTPTPASEI----DGV-- 234
           + ++LN++  V+LKLT +NYLLWKTQ  S + S  LLGF+TG TP PAS I    D +  
Sbjct: 6   FVSSLNISQVVTLKLTPTNYLLWKTQFESYLSSHLLLGFVTGATPRPASTIIVTKDDIQS 65

Query: 233 --VNPDLAAWTRTDRLVKAWITATIAEEALGTVVGLTTSAEVWKSLSTTYSQDSQAR 69
              N +   WTR D+LVKAWI  +++EEAL  V+GL ++ EVW  L+  +++ S  R
Sbjct: 66  EGANQEFLKWTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTR 122


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/121 (42%), Positives = 78/121 (64%), Gaps = 8/121 (6%)
 Frame = -1

Query: 407 SKYSYPANLNVANFVSLKLTSSNYLLWKTQVLSLVESQDLLGFITGDTPTPASE---IDG 237
           + Y +P N++V + V+LKLT SNYLLWKTQ  SL+ SQ L+GF+ G    P+     ++G
Sbjct: 3   TSYPFPDNVHVTSSVTLKLTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNG 62

Query: 236 VV-----NPDLAAWTRTDRLVKAWITATIAEEALGTVVGLTTSAEVWKSLSTTYSQDSQA 72
            V     NP   +W  TD+LV++W+  T++EE LG V  L+TS ++W SL+  +++ S A
Sbjct: 63  EVTSEEPNPLYESWFCTDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSVA 122

Query: 71  R 69
           R
Sbjct: 123 R 123


>gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]
          Length = 1309

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/119 (43%), Positives = 73/119 (61%), Gaps = 8/119 (6%)
 Frame = -1

Query: 401 YSYPANLNVANFVSLKLTSSNYLLWKTQVLSLVESQDLLGFITGDTPTPASE-------- 246
           Y +P N++V++ V+LKL  SNYLLWKTQ  SL+ SQ L+GF+ G    PA          
Sbjct: 5   YPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDDV 64

Query: 245 IDGVVNPDLAAWTRTDRLVKAWITATIAEEALGTVVGLTTSAEVWKSLSTTYSQDSQAR 69
              V NP    W  TD+LV++W+  T++EE LG V  LTTS ++W SL+  +++ S AR
Sbjct: 65  TSEVPNPQYEDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENFNKSSIAR 123