BLASTX nr result

ID: Cimicifuga21_contig00034251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034251
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20238.3| unnamed protein product [Vitis vinifera]              151   6e-35
ref|XP_002282857.1| PREDICTED: protein transport protein Sec24-l...   151   6e-35
ref|XP_002533043.1| Protein transport protein Sec24A, putative [...   149   3e-34
ref|XP_002316316.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_004163368.1| PREDICTED: protein transport protein Sec24-l...   146   1e-33

>emb|CBI20238.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/110 (69%), Positives = 84/110 (76%)
 Frame = +3

Query: 3   GSVEFVASTEYMVRPPMPPLYFFLIDVSFSAVQSGMLDIVAKTIRSCLDEMPGSPRTQIG 182
           GSVEFVA TEYMVRPPMPPLYFFLIDVS SAV+SGML++VA+TIRSCLDE+PGS RTQIG
Sbjct: 337 GSVEFVAPTEYMVRPPMPPLYFFLIDVSLSAVRSGMLEVVAQTIRSCLDELPGSTRTQIG 396

Query: 183 FMTYDSTLHFYNMKSSLTHPQMMXXXXXXXXXXXXXXXXXXXXXESRSTV 332
           F+T+DST+HFYNMKSSLT PQMM                     ESRS V
Sbjct: 397 FITFDSTIHFYNMKSSLTQPQMMVVSDLDDIFVPLPDDLLVNLSESRSVV 446


>ref|XP_002282857.1| PREDICTED: protein transport protein Sec24-like At3g07100-like
           [Vitis vinifera]
          Length = 1052

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/110 (69%), Positives = 84/110 (76%)
 Frame = +3

Query: 3   GSVEFVASTEYMVRPPMPPLYFFLIDVSFSAVQSGMLDIVAKTIRSCLDEMPGSPRTQIG 182
           GSVEFVA TEYMVRPPMPPLYFFLIDVS SAV+SGML++VA+TIRSCLDE+PGS RTQIG
Sbjct: 445 GSVEFVAPTEYMVRPPMPPLYFFLIDVSLSAVRSGMLEVVAQTIRSCLDELPGSTRTQIG 504

Query: 183 FMTYDSTLHFYNMKSSLTHPQMMXXXXXXXXXXXXXXXXXXXXXESRSTV 332
           F+T+DST+HFYNMKSSLT PQMM                     ESRS V
Sbjct: 505 FITFDSTIHFYNMKSSLTQPQMMVVSDLDDIFVPLPDDLLVNLSESRSVV 554


>ref|XP_002533043.1| Protein transport protein Sec24A, putative [Ricinus communis]
           gi|223527181|gb|EEF29351.1| Protein transport protein
           Sec24A, putative [Ricinus communis]
          Length = 1031

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/110 (66%), Positives = 84/110 (76%)
 Frame = +3

Query: 3   GSVEFVASTEYMVRPPMPPLYFFLIDVSFSAVQSGMLDIVAKTIRSCLDEMPGSPRTQIG 182
           GSVEFVA TEYMVRPPMPPLYFFLIDVS SAV+SG++++VA+TI+SCLD++PG PRTQIG
Sbjct: 420 GSVEFVAPTEYMVRPPMPPLYFFLIDVSISAVRSGVIEVVAQTIKSCLDDLPGFPRTQIG 479

Query: 183 FMTYDSTLHFYNMKSSLTHPQMMXXXXXXXXXXXXXXXXXXXXXESRSTV 332
           F+TYDST+HFYNMKSSLT PQMM                     ESRS V
Sbjct: 480 FITYDSTIHFYNMKSSLTQPQMMVVSDLDDIFVPLPDDLLVNLSESRSVV 529


>ref|XP_002316316.1| predicted protein [Populus trichocarpa] gi|222865356|gb|EEF02487.1|
           predicted protein [Populus trichocarpa]
          Length = 1037

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/110 (65%), Positives = 84/110 (76%)
 Frame = +3

Query: 3   GSVEFVASTEYMVRPPMPPLYFFLIDVSFSAVQSGMLDIVAKTIRSCLDEMPGSPRTQIG 182
           GSVEFVA TEYMVRPPMPPL+FFLIDVS SAV+SGM+++VA+TI+SCLDE+PG PRTQ+G
Sbjct: 426 GSVEFVAPTEYMVRPPMPPLFFFLIDVSVSAVRSGMIEVVAQTIKSCLDELPGYPRTQVG 485

Query: 183 FMTYDSTLHFYNMKSSLTHPQMMXXXXXXXXXXXXXXXXXXXXXESRSTV 332
           F+T+DST+HFYNMKSSLT PQMM                     ESRS V
Sbjct: 486 FITFDSTIHFYNMKSSLTQPQMMVVSDLDDIFVPLPDDLLVNLSESRSVV 535


>ref|XP_004163368.1| PREDICTED: protein transport protein Sec24-like At3g07100-like
           [Cucumis sativus]
          Length = 1031

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/83 (81%), Positives = 78/83 (93%)
 Frame = +3

Query: 3   GSVEFVASTEYMVRPPMPPLYFFLIDVSFSAVQSGMLDIVAKTIRSCLDEMPGSPRTQIG 182
           GSV+FVA TEYMVRPPMPPLYFFLIDVS +AV+SGML++VA+TIRSCLDE+PGS RTQIG
Sbjct: 419 GSVDFVAPTEYMVRPPMPPLYFFLIDVSIAAVRSGMLEVVAQTIRSCLDELPGSTRTQIG 478

Query: 183 FMTYDSTLHFYNMKSSLTHPQMM 251
           F T+DST+HFYNMKS+LT PQMM
Sbjct: 479 FATFDSTIHFYNMKSTLTQPQMM 501


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