BLASTX nr result

ID: Cimicifuga21_contig00034228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034228
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23132.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine...    93   2e-17
emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]    93   2e-17
ref|XP_002526891.1| serine-threonine protein kinase, plant-type,...    91   1e-16
ref|XP_002512884.1| serine-threonine protein kinase, plant-type,...    89   3e-16

>emb|CBI23132.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 5/99 (5%)
 Frame = +1

Query: 118 NSFLLITLFSTLINLFLPGFSLSTVSTSRNESDFLSLIAIKNGI-----GGLNSWNESYH 282
           +SFLL T+    I+L+ P     T S+ +NE+D L+LIA K+GI     G L+SWN+S H
Sbjct: 6   SSFLLYTVL-LCIHLWRP----VTASSMQNETDRLALIAFKDGITQDPLGMLSSWNDSLH 60

Query: 283 FCQWKGVMCSSKHHQRVTALNLSGQNLVGSIPPHIGNLT 399
           FC+W GV CS +H  RVT LNL    LVGS+ PHIGNLT
Sbjct: 61  FCRWSGVYCSRRHVHRVTKLNLFSYGLVGSLSPHIGNLT 99


>ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570 [Vitis vinifera]
          Length = 1009

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 5/99 (5%)
 Frame = +1

Query: 118 NSFLLITLFSTLINLFLPGFSLSTVSTSRNESDFLSLIAIKNGI-----GGLNSWNESYH 282
           +SFLL T+    I+L+ P     T S+ +NE+D L+LIA K+GI     G L+SWN+S H
Sbjct: 6   SSFLLYTVL-LCIHLWRP----VTASSMQNETDRLALIAFKDGITQDPLGMLSSWNDSLH 60

Query: 283 FCQWKGVMCSSKHHQRVTALNLSGQNLVGSIPPHIGNLT 399
           FC+W GV CS +H  RVT LNL    LVGS+ PHIGNLT
Sbjct: 61  FCRWSGVYCSRRHVHRVTKLNLFSYGLVGSLSPHIGNLT 99


>emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]
          Length = 1009

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 5/99 (5%)
 Frame = +1

Query: 118 NSFLLITLFSTLINLFLPGFSLSTVSTSRNESDFLSLIAIKNGI-----GGLNSWNESYH 282
           +SFLL T+    I+L+ P     T S+ +NE+D L+LIA K+GI     G L+SWN+S H
Sbjct: 6   SSFLLYTVL-LCIHLWRP----VTASSMQNETDRLALIAFKDGITQDPLGMLSSWNDSLH 60

Query: 283 FCQWKGVMCSSKHHQRVTALNLSGQNLVGSIPPHIGNLT 399
           FC+W GV CS +H  RVT LNL    LVGS+ PHIGNLT
Sbjct: 61  FCRWSGVYCSRRHVHRVTKLNLFSYGLVGSLSPHIGNLT 99


>ref|XP_002526891.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223533790|gb|EEF35522.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 1013

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
 Frame = +1

Query: 133 ITLFSTLINLFLPGFSLSTVSTSRNESDFLSLIAIKNGI-----GGLNSWNESYHFCQWK 297
           + L++ +++       L   S  +NE+D ++L+A K  I     G LNSWN S H+CQW+
Sbjct: 7   LVLYAIILSFISSNCFLGYASEFKNETDKMALLAFKGAITSDPNGALNSWNTSLHYCQWQ 66

Query: 298 GVMCSSKHHQRVTALNLSGQNLVGSIPPHIGNLT 399
           G+ CSSKH +RVT L+LS Q LVG +  HIGNL+
Sbjct: 67  GISCSSKHRERVTILDLSSQGLVGPVSAHIGNLS 100


>ref|XP_002512884.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223547895|gb|EEF49387.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 600

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 49/103 (47%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
 Frame = +1

Query: 106 FSNFNSFLLITLFSTLINLFLPGFSLSTVSTSRNESDFLSLIAIKNGI-----GGLNSWN 270
           F N  S LL+ L   L+  F         + S NE+D L+L+  K GI     G  NSWN
Sbjct: 3   FHNHRSPLLVYL--QLVIFFFINVPWLQANASGNETDRLALLKFKQGISSDPHGIFNSWN 60

Query: 271 ESYHFCQWKGVMCSSKHHQRVTALNLSGQNLVGSIPPHIGNLT 399
           +S HFC+W G+ C  + HQRVT+L+L GQNL+GSI PHIGNL+
Sbjct: 61  DSLHFCKWYGITCG-RRHQRVTSLDLKGQNLIGSISPHIGNLS 102


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