BLASTX nr result

ID: Cimicifuga21_contig00034184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034184
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like ...   110   9e-23
ref|XP_003532001.1| PREDICTED: polygalacturonase At1g48100 isofo...   107   8e-22
ref|XP_003532000.1| PREDICTED: polygalacturonase At1g48100 isofo...   107   8e-22
ref|XP_003531999.1| PREDICTED: polygalacturonase At1g48100 isofo...   107   8e-22
ref|XP_003552026.1| PREDICTED: polygalacturonase At1g48100-like ...   106   2e-21

>ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
          Length = 505

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/75 (69%), Positives = 59/75 (78%)
 Frame = -1

Query: 227 KGNDGGNSATFTVLDFGAKGDGNVDDTKXXXXXXXXACKVEGSTVLVPSDYVFLVGPISF 48
           KG   G+SA F VLDFGAKG+G  DDTK        ACKVEGSTV+VP+DYVF VGPISF
Sbjct: 79  KGPSAGDSAIFNVLDFGAKGNGETDDTKAFEDAWAEACKVEGSTVMVPADYVFFVGPISF 138

Query: 47  SGPYCKPNIVFQLDG 3
           SGPYC+P+I+FQLDG
Sbjct: 139 SGPYCQPDIIFQLDG 153


>ref|XP_003532001.1| PREDICTED: polygalacturonase At1g48100 isoform 3 [Glycine max]
          Length = 506

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/75 (72%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
 Frame = -1

Query: 221 NDGGNS--ATFTVLDFGAKGDGNVDDTKXXXXXXXXACKVEGSTVLVPSDYVFLVGPISF 48
           N GG+S   TF VLDFGAKGDG  DDTK        ACKVE ST+LVP+DYVF VGPISF
Sbjct: 112 NGGGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVESSTMLVPADYVFFVGPISF 171

Query: 47  SGPYCKPNIVFQLDG 3
           SGPYCKP+IVFQLDG
Sbjct: 172 SGPYCKPSIVFQLDG 186


>ref|XP_003532000.1| PREDICTED: polygalacturonase At1g48100 isoform 2 [Glycine max]
          Length = 523

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/75 (72%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
 Frame = -1

Query: 221 NDGGNS--ATFTVLDFGAKGDGNVDDTKXXXXXXXXACKVEGSTVLVPSDYVFLVGPISF 48
           N GG+S   TF VLDFGAKGDG  DDTK        ACKVE ST+LVP+DYVF VGPISF
Sbjct: 112 NGGGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVESSTMLVPADYVFFVGPISF 171

Query: 47  SGPYCKPNIVFQLDG 3
           SGPYCKP+IVFQLDG
Sbjct: 172 SGPYCKPSIVFQLDG 186


>ref|XP_003531999.1| PREDICTED: polygalacturonase At1g48100 isoform 1 [Glycine max]
          Length = 538

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/75 (72%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
 Frame = -1

Query: 221 NDGGNS--ATFTVLDFGAKGDGNVDDTKXXXXXXXXACKVEGSTVLVPSDYVFLVGPISF 48
           N GG+S   TF VLDFGAKGDG  DDTK        ACKVE ST+LVP+DYVF VGPISF
Sbjct: 112 NGGGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVESSTMLVPADYVFFVGPISF 171

Query: 47  SGPYCKPNIVFQLDG 3
           SGPYCKP+IVFQLDG
Sbjct: 172 SGPYCKPSIVFQLDG 186


>ref|XP_003552026.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
          Length = 538

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/75 (69%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
 Frame = -1

Query: 221 NDGGNSA--TFTVLDFGAKGDGNVDDTKXXXXXXXXACKVEGSTVLVPSDYVFLVGPISF 48
           N GG+S+  TF VLDFGAKGDG  DDTK        ACK+E ST+LVP+DY F VGPISF
Sbjct: 112 NGGGHSSATTFNVLDFGAKGDGKSDDTKAFQEAWAEACKIESSTMLVPADYAFFVGPISF 171

Query: 47  SGPYCKPNIVFQLDG 3
           SGPYCKP+IVFQLDG
Sbjct: 172 SGPYCKPSIVFQLDG 186


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