BLASTX nr result

ID: Cimicifuga21_contig00034182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034182
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533475.1| receptor protein kinase, putative [Ricinus c...    84   9e-15
ref|XP_002302927.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002305223.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002265087.2| PREDICTED: probable receptor protein kinase ...    79   5e-13
ref|XP_002281552.2| PREDICTED: probable receptor protein kinase ...    78   7e-13

>ref|XP_002533475.1| receptor protein kinase, putative [Ricinus communis]
           gi|223526668|gb|EEF28907.1| receptor protein kinase,
           putative [Ricinus communis]
          Length = 951

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = +3

Query: 18  SQANDAQVMNDLKKGLVLQNIL-WSGTDYCNWQGVTCSGDKRVIRIQI-KDQATGEFPSS 191
           S + DA VM  L+K L + + L WS  D CNW+ VTCS +KRV RIQI +    G  PS+
Sbjct: 31  SPSEDAPVMFALRKSLNVPDSLGWSDPDPCNWKHVTCSDEKRVTRIQIGRQNLEGTLPSN 90

Query: 192 FNNLTALQYLEFRGTQIGGALPTLKGLSSLQVVL 293
             NLT L+ LE +   I G LPTLKGL+SL VV+
Sbjct: 91  LQNLTQLERLELQWNSISGPLPTLKGLASLLVVM 124


>ref|XP_002302927.1| predicted protein [Populus trichocarpa] gi|222844653|gb|EEE82200.1|
           predicted protein [Populus trichocarpa]
          Length = 945

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 46/90 (51%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = +3

Query: 30  DAQVMNDLKKGLVLQNIL-WSGTDYCNWQGVTCSGDKRVIRIQI-KDQATGEFPSSFNNL 203
           DA+VM  LKK L + + L WS  D CNW  V CS +KRV RIQI +    G  PS+  NL
Sbjct: 33  DAEVMFSLKKSLNVPDSLGWSDPDPCNWNHVVCSDEKRVTRIQIGRQNLQGTLPSNLRNL 92

Query: 204 TALQYLEFRGTQIGGALPTLKGLSSLQVVL 293
             L+ LE +   I G LP+L GLSSLQV+L
Sbjct: 93  AQLERLELQYNNISGPLPSLNGLSSLQVIL 122


>ref|XP_002305223.1| predicted protein [Populus trichocarpa] gi|222848187|gb|EEE85734.1|
           predicted protein [Populus trichocarpa]
          Length = 946

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/95 (51%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
 Frame = +3

Query: 18  SQAN-DAQVMNDLKKGLVLQNIL-WSGTDYCNWQGVTCSGDKRVIRIQI-KDQATGEFPS 188
           SQA+ DA+VM  LKK L + + L WS  D C W  V CS +KRV RIQI +    G  PS
Sbjct: 28  SQASPDAEVMLSLKKSLNVPDSLGWSDPDPCKWNHVGCSDEKRVTRIQIGRQNLQGTLPS 87

Query: 189 SFNNLTALQYLEFRGTQIGGALPTLKGLSSLQVVL 293
           +  NLT L+ LE +   I G LP+L GLSSLQV+L
Sbjct: 88  NLQNLTQLERLELQYNNISGHLPSLNGLSSLQVIL 122


>ref|XP_002265087.2| PREDICTED: probable receptor protein kinase TMK1-like [Vitis
           vinifera]
          Length = 889

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = +3

Query: 72  QNILWSGTDYCNWQGVTCSGDKRVIRIQIKDQAT-GEFPSSFNNLTALQYLEFRGTQIGG 248
           +++ WSG D C W+ V CS DKRV RIQ+  Q   G  PSS  NLT L+ LE +   I G
Sbjct: 12  ESLGWSGPDPCEWKHVVCSEDKRVTRIQVGRQGLQGTLPSSLGNLTELERLELQWNNISG 71

Query: 249 ALPTLKGLSSLQVVL 293
            LP+LKGLSSLQV++
Sbjct: 72  PLPSLKGLSSLQVLM 86


>ref|XP_002281552.2| PREDICTED: probable receptor protein kinase TMK1-like [Vitis
           vinifera]
          Length = 937

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
 Frame = +3

Query: 18  SQANDAQVMNDLKKGLVLQNIL-WSGTDYCNWQGVTCSGDKRVIRIQIKDQ-ATGEFPSS 191
           S + DA VM  LKK L   + L WS +D C W GV+C GD+RV RIQI  +   G  PS+
Sbjct: 23  SSSGDADVMQVLKKNLNQPSDLGWSDSDPCKWDGVSCDGDRRVTRIQIGGKNLKGSLPSN 82

Query: 192 FNNLTALQYLEFRGTQIGGALPTLKGLSSLQVVL 293
             +LTAL+ LE +  Q+ G LP+L  LS LQ +L
Sbjct: 83  LTDLTALEILEVQYNQLSGPLPSLSRLSLLQRLL 116


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