BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034171
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    87   1e-15
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 60/116 (51%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
 Frame = -3

Query: 345 MKRAKGILASLRHVESFPQTQTSTGRPLHFQVTQYSHLSPPLFSSSMSNQAYNYDF-LNT 169
           M RAK IL S+R   SF  TQ      L +QVTQ S  SP     S SNQ+Y   F    
Sbjct: 1   MNRAKAILFSIRFTNSFRSTQFRRASSLCYQVTQSSRFSP-----SFSNQSYTSAFPYIL 55

Query: 168 HQKFHFSMKPNSIVELVTSSNKWSKYLEKELEKSLPTLNYETVLYVLKNLDTNPQK 1
           + K  FS KPNSIVELV   N WS  LE ELEKS   L +ETV+YVLK LD +PQ+
Sbjct: 56  YGKLFFSSKPNSIVELVLE-NDWSDELESELEKSSSVLTHETVIYVLKKLDKDPQR 110


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 53/115 (46%), Positives = 68/115 (59%)
 Frame = -3

Query: 345 MKRAKGILASLRHVESFPQTQTSTGRPLHFQVTQYSHLSPPLFSSSMSNQAYNYDFLNTH 166
           M RA+ IL SLR       T+ ST RP    +TQ +H  P   S   S   Y  D++N H
Sbjct: 1   MNRARTILVSLRLSNFLLSTRISTTRPF---LTQVTHFFPCFLSREHS---YTSDYVNIH 54

Query: 165 QKFHFSMKPNSIVELVTSSNKWSKYLEKELEKSLPTLNYETVLYVLKNLDTNPQK 1
           +K + S KP+S+VEL+ S N WS  LE +LE S P L +ETV+YVLK LD +P K
Sbjct: 55  KKLYSSSKPSSLVELL-SVNDWSPELETQLENSSPLLTHETVIYVLKKLDKDPHK 108


>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 50/118 (42%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
 Frame = -3

Query: 345 MKRAKGILASLRHVESFPQTQTSTGRPLHF---QVTQYSHLSPPLFSSSMSNQAYNYDFL 175
           M R + I+ +LR +ES   ++ +  R L     QVT +S  +P    S + + ++++   
Sbjct: 1   MNRLRAIVVNLRFLESPLASRVTATRSLLLTRNQVTHFSLCTP----SPLLDNSHHFLLP 56

Query: 174 NTHQKFHFSMKPNSIVELVTSSNKWSKYLEKELEKSLPTLNYETVLYVLKNLDTNPQK 1
           N HQ  +FS KPNSIVELV +S+ WSK LE+ELEK  P++ +ETV+YVLK ++ NP+K
Sbjct: 57  NIHQNLYFSSKPNSIVELVLTSD-WSKGLEQELEKCYPSMTHETVVYVLKRMEANPEK 113


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 54/118 (45%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
 Frame = -3

Query: 345 MKRAKGILASLRHVESFPQTQTSTGRPLHFQVTQYSHLSP-PLFSSSMSNQAYNYDFLNT 169
           M R K I +SLR +ES   T+    R    QVT +S  +P PLF  S     ++  F  T
Sbjct: 1   MNRVKAIASSLRTLESSLATRVLVTRN---QVTHFSLHNPLPLFDRS-----HHLRFPIT 52

Query: 168 HQKFHFSMKP--NSIVELVTSSNKWSKYLEKELEKSLPTLNYETVLYVLKNLDTNPQK 1
           H K +FS KP  NSIVEL+ + N WS+ LE +LE   P++ +ETVLYV+K LD NP+K
Sbjct: 53  HHKLYFSTKPKPNSIVELLLT-NDWSQALELKLENRFPSMPHETVLYVIKRLDKNPEK 109


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 50/115 (43%), Positives = 63/115 (54%)
 Frame = -3

Query: 345 MKRAKGILASLRHVESFPQTQTSTGRPLHFQVTQYSHLSPPLFSSSMSNQAYNYDFLNTH 166
           M R   I  SLR   SF  T     R  + QVT++S       SS +S+Q+    F   H
Sbjct: 1   MTRRNAIFTSLRLANSFFST-----RSRYPQVTRFSP------SSYVSHQSLVSHFTINH 49

Query: 165 QKFHFSMKPNSIVELVTSSNKWSKYLEKELEKSLPTLNYETVLYVLKNLDTNPQK 1
               FS  P S+++LV S+N WS+ LE ELE   PTL +ETV+YVLK LD  PQK
Sbjct: 50  PVLFFSSNPQSLLQLV-STNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQK 103