BLASTX nr result

ID: Cimicifuga21_contig00034170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034170
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531342.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_002273819.1| PREDICTED: uncharacterized protein LOC100241...    78   6e-13
emb|CAN76818.1| hypothetical protein VITISV_029717 [Vitis vinifera]    78   6e-13
ref|XP_004142209.1| PREDICTED: uncharacterized protein LOC101207...    77   1e-12
ref|XP_002308152.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>ref|XP_002531342.1| conserved hypothetical protein [Ricinus communis]
           gi|223529064|gb|EEF31049.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/77 (45%), Positives = 48/77 (62%)
 Frame = +2

Query: 17  INIRHPMLFYAVTWTLMLTVTVAIVSFCPEXXXXXXXXXXXXXXGTCEGEGLIRIPVDVP 196
           I +R P+L YA TWT +LT TVA+ SF PE                C+ EG +RIP+D P
Sbjct: 13  ITMRRPVLLYAATWTALLTATVAVASFSPEMAFVSAISTSSSFARQCKAEGTVRIPLDAP 72

Query: 197 GEMICLPAQLFRTSRMD 247
           GE++CLPA++F  S++D
Sbjct: 73  GEILCLPARMFMRSKID 89


>ref|XP_002273819.1| PREDICTED: uncharacterized protein LOC100241385 [Vitis vinifera]
          Length = 120

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/82 (42%), Positives = 47/82 (57%)
 Frame = +2

Query: 2   SVFRQINIRHPMLFYAVTWTLMLTVTVAIVSFCPEXXXXXXXXXXXXXXGTCEGEGLIRI 181
           S+ R +  R P+L YA  WT +L+ TVA+ SF PE                C+ EG IR+
Sbjct: 8   SILRPLTSRWPLLLYAAAWTALLSATVAVASFLPEAAFVWAISPSSSFSRACDAEGFIRV 67

Query: 182 PVDVPGEMICLPAQLFRTSRMD 247
           P+D+PGE++CLPA LF    MD
Sbjct: 68  PMDLPGEVLCLPAHLFAKFSMD 89


>emb|CAN76818.1| hypothetical protein VITISV_029717 [Vitis vinifera]
          Length = 120

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/82 (42%), Positives = 47/82 (57%)
 Frame = +2

Query: 2   SVFRQINIRHPMLFYAVTWTLMLTVTVAIVSFCPEXXXXXXXXXXXXXXGTCEGEGLIRI 181
           S+ R +  R P+L YA  WT +L+ TVA+ SF PE                C+ EG IR+
Sbjct: 8   SILRPLTSRWPLLLYAAAWTALLSATVAVASFLPEAAFVWAISPSSSFSRACDAEGFIRV 67

Query: 182 PVDVPGEMICLPAQLFRTSRMD 247
           P+D+PGE++CLPA LF    MD
Sbjct: 68  PMDLPGEVLCLPAHLFAKFXMD 89


>ref|XP_004142209.1| PREDICTED: uncharacterized protein LOC101207834 [Cucumis sativus]
           gi|449525345|ref|XP_004169678.1| PREDICTED:
           uncharacterized LOC101207834 [Cucumis sativus]
          Length = 118

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 31/81 (38%), Positives = 53/81 (65%)
 Frame = +2

Query: 5   VFRQINIRHPMLFYAVTWTLMLTVTVAIVSFCPEXXXXXXXXXXXXXXGTCEGEGLIRIP 184
           ++R++  R P+L ++ +WTL+LT+TVA  SF PE                C+ +GL+R+P
Sbjct: 5   LYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVP 64

Query: 185 VDVPGEMICLPAQLFRTSRMD 247
           +D+PG+++C+P +LFR S +D
Sbjct: 65  MDIPGDVLCVPDRLFRKSGID 85


>ref|XP_002308152.1| predicted protein [Populus trichocarpa] gi|222854128|gb|EEE91675.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = +2

Query: 32  PMLFYAVTWTLMLTVTVAIVSFCPEXXXXXXXXXXXXXXGTCEGEGLIRIPVDVPGEMIC 211
           P++ Y+ TWT +LT+TVA+ SF PE                CE EG +R+P+DVPGE++C
Sbjct: 2   PLILYSATWTSLLTLTVAVASFSPEFAFVLTISSFSQG---CEQEGTVRVPLDVPGEVMC 58

Query: 212 LPAQLFRTS 238
           LPA LF+ S
Sbjct: 59  LPAHLFKRS 67


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