BLASTX nr result

ID: Cimicifuga21_contig00034146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034146
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267...   137   9e-31
ref|XP_002521431.1| conserved hypothetical protein [Ricinus comm...   125   4e-27
gb|AAC33277.1| cotton fiber expressed protein 2 [Gossypium hirsu...   124   6e-27
gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]           124   6e-27
gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsu...   121   5e-26

>ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267532 [Vitis vinifera]
          Length = 320

 Score =  137 bits (345), Expect = 9e-31
 Identities = 80/152 (52%), Positives = 98/152 (64%)
 Frame = -1

Query: 456 NSVVLKNPVEFRSEFCEIVDYNADLMKNQNVVRSSDYEIPEKKVKGEEESKNQKAKSVFG 277
           N VV KN VE R EF  + D NA +       R+ D    + ++KG E            
Sbjct: 107 NGVVSKNVVELRPEFGYVYDANAVVE-----ARAPD---AKTEMKGLE----------MN 148

Query: 276 EDNGFVISRSSWTPSRRDSTEIRNEFSFSPEKPLVSVRFSHRKPVKASPEAGKLLGVAKP 97
           + + F ISRSSWTP R+DS E         EKPLVS+RF HR+ VK+SPEAGK+LGV+KP
Sbjct: 149 DSDEFTISRSSWTPERKDSMENM----IPAEKPLVSMRFGHRRAVKSSPEAGKVLGVSKP 204

Query: 96  KRNDTLESTWKTITDGRPIPLARHLKKSDTWE 1
           KR+DTLESTWKTITDGRP+PL RHLKK+D+ E
Sbjct: 205 KRHDTLESTWKTITDGRPMPLTRHLKKADSLE 236


>ref|XP_002521431.1| conserved hypothetical protein [Ricinus communis]
           gi|223539330|gb|EEF40921.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
 Frame = -1

Query: 303 NQKAKSVFGEDNGFVISRSSWTPSRR-DSTEIRNEFSFSPEKPLVSVRFSHRKPVKASPE 127
           N   + V  +D  FVIS+S+W PS+R D +E + E     EKPL+S RF HRKPVKASPE
Sbjct: 147 NGSLEVVEDKDEDFVISKSTWVPSKRIDPSESQPELLIPAEKPLISARFGHRKPVKASPE 206

Query: 126 AGKLLGVAKPKRNDTLESTWKTITDGRPIPLARHLKKSDTWE 1
            G+ L VAKPKR +TLE+TWK IT+GRP+PL RHLKKSDT++
Sbjct: 207 GGRALRVAKPKRQETLENTWKMITEGRPMPLTRHLKKSDTFD 248


>gb|AAC33277.1| cotton fiber expressed protein 2 [Gossypium hirsutum]
          Length = 275

 Score =  124 bits (312), Expect = 6e-27
 Identities = 69/141 (48%), Positives = 93/141 (65%), Gaps = 6/141 (4%)
 Frame = -1

Query: 405 IVDYNADLMKNQNVVRSSDYEIPEKKVKGEEESK-NQKAKSVFGED----NGFVISRSSW 241
           +V+Y      + + V SSD+   E +   E E++ +++  +V  ED    N FVIS+S W
Sbjct: 101 MVEYETKSGWDSDAVESSDFVYEENQRGEEVETRVSEEESNVAVEDDRDGNEFVISKSEW 160

Query: 240 TP-SRRDSTEIRNEFSFSPEKPLVSVRFSHRKPVKASPEAGKLLGVAKPKRNDTLESTWK 64
            P SR DS+EI  +     EKP  S RF HRKPVK +PE G+ L VAKPKR++TLE+TWK
Sbjct: 161 IPPSRTDSSEIPLDALLIQEKPAPSSRFGHRKPVKVNPEGGRALKVAKPKRHETLENTWK 220

Query: 63  TITDGRPIPLARHLKKSDTWE 1
            IT+G+ +PL+RHLKKSDTWE
Sbjct: 221 MITEGKSMPLSRHLKKSDTWE 241


>gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]
          Length = 331

 Score =  124 bits (312), Expect = 6e-27
 Identities = 69/142 (48%), Positives = 92/142 (64%), Gaps = 7/142 (4%)
 Frame = -1

Query: 405 IVDYNADLMKNQNVVRSSDYEIPEKKVKGEE------ESKNQKAKSVFGEDNGFVISRSS 244
           +V+Y      + + V SSD+ + E+  +GEE      E ++  A     + N FVIS+S 
Sbjct: 101 MVEYETKSGWDSDAVESSDF-VYEENQRGEEVETRVSEEESNVAVKDDRDGNEFVISKSE 159

Query: 243 WTP-SRRDSTEIRNEFSFSPEKPLVSVRFSHRKPVKASPEAGKLLGVAKPKRNDTLESTW 67
           W P SR DS+EI  +     EKP  S RF HRKPVKA+PE G+ L  AKPKR++TLE+TW
Sbjct: 160 WIPPSRTDSSEIPLDALLIQEKPAPSSRFGHRKPVKANPEGGRALKAAKPKRHETLENTW 219

Query: 66  KTITDGRPIPLARHLKKSDTWE 1
           K IT+G+ +PL+RHLKKSDTWE
Sbjct: 220 KMITEGKSMPLSRHLKKSDTWE 241


>gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsutum]
          Length = 331

 Score =  121 bits (304), Expect = 5e-26
 Identities = 69/142 (48%), Positives = 93/142 (65%), Gaps = 7/142 (4%)
 Frame = -1

Query: 405 IVDYNADLMKNQNVVRSSDYEIPEKKVKGEEESK--NQKAKSVFGED----NGFVISRSS 244
           IV+Y+       + V SSD+ + E+  +GEE +   +++  +V  ED    N FVIS+S 
Sbjct: 101 IVEYDTKSGWGSDAVESSDF-VYEENQRGEEVATRVSEEESNVAVEDDRDGNEFVISKSE 159

Query: 243 WTP-SRRDSTEIRNEFSFSPEKPLVSVRFSHRKPVKASPEAGKLLGVAKPKRNDTLESTW 67
           W P SR DS+EI  +     EKP  S R  HRKPVK +PE G+ L  AKPKR++TLE+TW
Sbjct: 160 WIPPSRTDSSEIPLDALLIQEKPAPSSRSGHRKPVKVNPEGGRALKAAKPKRHETLENTW 219

Query: 66  KTITDGRPIPLARHLKKSDTWE 1
           K IT+G+ +PL+RHLKKSDTWE
Sbjct: 220 KMITEGKSMPLSRHLKKSDTWE 241


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