BLASTX nr result

ID: Cimicifuga21_contig00034118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034118
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25963.1| unknown [Picea sitchensis]                              76   3e-12
ref|XP_002316393.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
emb|CAN73477.1| hypothetical protein VITISV_042677 [Vitis vinifera]    69   5e-10
ref|XP_003632746.1| PREDICTED: uncharacterized protein LOC100854...    68   9e-10
emb|CBI30148.3| unnamed protein product [Vitis vinifera]               68   9e-10

>gb|ABK25963.1| unknown [Picea sitchensis]
          Length = 212

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
 Frame = +2

Query: 233 SLETMENNVSNSHSPQKKPSLGSTFTNEEERPTDDAP---TFVNQAARTWHEVRKEWVGD 403
           S E MENNVSNSHS ++ PS+GST   EE + T+D+    TFVN A   W+E R+EW+G+
Sbjct: 99  SPEDMENNVSNSHSMRRNPSVGSTSQAEETQLTNDSTNSTTFVNHALIMWNERRREWLGN 158

Query: 404 QSQKPQRVPKDPVI 445
           +SQ   ++P++P+I
Sbjct: 159 RSQNQPQMPREPII 172


>ref|XP_002316393.1| predicted protein [Populus trichocarpa] gi|222865433|gb|EEF02564.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 245 MENNVSNSHSPQKKPSLGSTFTNEEERPTD---DAPTFVNQAARTWHEVRKEWVGDQSQK 415
           ME N   SHS +K+P   ST TN E   T+    A  F+N AA  WHE R++W GDQSQ+
Sbjct: 1   MEVNPVRSHSNEKQPLEHSTSTNGEHEHTEKEKSASVFINHAAIAWHESRRKWTGDQSQQ 60

Query: 416 PQRVPKDPVI 445
           PQR+ KDP+I
Sbjct: 61  PQRMIKDPII 70


>emb|CAN73477.1| hypothetical protein VITISV_042677 [Vitis vinifera]
          Length = 294

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +2

Query: 230 FSLETMENNVSNSHSPQKKPSLGSTFTNEEERPTDDAP-TFVNQAARTWHEVRKEWVGDQ 406
           F +E  E N   SHS +K+    S   NE++ P + +   F+N AA  WH+ R+EWVGDQ
Sbjct: 170 FIMEMAEVNTGGSHSNEKQTLECSASANEQKEPMEVSTFVFINHAAIAWHDRRREWVGDQ 229

Query: 407 SQKPQRVPKDPVI 445
           SQK QR  KDP+I
Sbjct: 230 SQKSQRKQKDPII 242


>ref|XP_003632746.1| PREDICTED: uncharacterized protein LOC100854479 [Vitis vinifera]
          Length = 113

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
 Frame = +2

Query: 236 LETMENNVSNSHSPQKKPSLGSTFTNEEERPTDDA---PTFVNQAARTWHEVRKEWVGDQ 406
           +E ME N  N  S +K PS GS   NEE    +       F+N A   WH+ RKEWVGD+
Sbjct: 1   MENMEINGGNPCSNEKLPSEGSKNVNEERNSIEKEVCDSVFINHAEIAWHQRRKEWVGDE 60

Query: 407 SQKPQRVPKDPVI 445
           SQKP+RV K+PV+
Sbjct: 61  SQKPKRVHKEPVM 73


>emb|CBI30148.3| unnamed protein product [Vitis vinifera]
          Length = 91

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
 Frame = +2

Query: 236 LETMENNVSNSHSPQKKPSLGSTFTNEEERPTDDA---PTFVNQAARTWHEVRKEWVGDQ 406
           +E ME N  N  S +K PS GS   NEE    +       F+N A   WH+ RKEWVGD+
Sbjct: 1   MENMEINGGNPCSNEKLPSEGSKNVNEERNSIEKEVCDSVFINHAEIAWHQRRKEWVGDE 60

Query: 407 SQKPQRVPKDPVI 445
           SQKP+RV K+PV+
Sbjct: 61  SQKPKRVHKEPVM 73


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