BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034111
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]              121   1e-25
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...   121   1e-25
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...   105   9e-21
ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thali...    98   2e-18
sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL...    98   2e-18

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  121 bits (304), Expect = 1e-25
 Identities = 78/142 (54%), Positives = 101/142 (71%), Gaps = 5/142 (3%)
 Frame = +2

Query: 8   LQIVIQRPGESTH-RRSVDSAIS--RKRSESVAVGCFDRGVRKDGLLLSETAKAADRENF 178
           +QIV+ +P E+T  RRS+DS+ S  RKR+E VAVGCFDR  RKD LLL+    + DR +F
Sbjct: 230 VQIVLHKPDETTSSRRSLDSSSSSSRKRNEPVAVGCFDRP-RKDELLLT----SEDRNSF 284

Query: 179 LRRFDHRIILST--ECGSHKRWSDLKPSDLLYLQSEMIIANSGRYSLSSSRQKREEEEDK 352
            RR DHRII+S     G H+RWSD++PSDLLYL+SEMII+++ R    SS     E    
Sbjct: 285 ERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRL---SSCHGTIEGGSW 341

Query: 353 NGRNVINTRSVSEITGLNRFAN 418
           +GR+VIN+RSVSEITGL+R  +
Sbjct: 342 SGRSVINSRSVSEITGLSRLGS 363


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score =  121 bits (304), Expect = 1e-25
 Identities = 78/142 (54%), Positives = 101/142 (71%), Gaps = 5/142 (3%)
 Frame = +2

Query: 8   LQIVIQRPGESTH-RRSVDSAIS--RKRSESVAVGCFDRGVRKDGLLLSETAKAADRENF 178
           +QIV+ +P E+T  RRS+DS+ S  RKR+E VAVGCFDR  RKD LLL+    + DR +F
Sbjct: 230 VQIVLHKPDETTSSRRSLDSSSSSSRKRNEPVAVGCFDRP-RKDELLLT----SEDRNSF 284

Query: 179 LRRFDHRIILST--ECGSHKRWSDLKPSDLLYLQSEMIIANSGRYSLSSSRQKREEEEDK 352
            RR DHRII+S     G H+RWSD++PSDLLYL+SEMII+++ R    SS     E    
Sbjct: 285 ERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRL---SSCHGTIEGGSW 341

Query: 353 NGRNVINTRSVSEITGLNRFAN 418
           +GR+VIN+RSVSEITGL+R  +
Sbjct: 342 SGRSVINSRSVSEITGLSRLGS 363


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
           gi|223550481|gb|EEF51968.1| ring finger protein,
           putative [Ricinus communis]
          Length = 493

 Score =  105 bits (261), Expect = 9e-21
 Identities = 77/191 (40%), Positives = 105/191 (54%), Gaps = 54/191 (28%)
 Frame = +2

Query: 11  QIVIQRPGESTH-----RRSVDSAISRK-------RSESVAVGCFDR---GVRKDGLLLS 145
           QIV+QRP  +       RRS+DS   +K       R+ESVAVGCFDR     RKDGLLL 
Sbjct: 259 QIVVQRPSATEQTTWFARRSLDSFSMKKNKNNHITRNESVAVGCFDRYQSHQRKDGLLLL 318

Query: 146 ETAKAADRENF-------------------------LRRFDHRIILSTECGSHKRWSDLK 250
                 D ++                            RF+HRII+S    S +RWSD+ 
Sbjct: 319 TNNSNGDGDSDGDDHSLESRRTSTASVNAGAGAGVDKTRFEHRIIVSGNA-SDERWSDVH 377

Query: 251 PSDLLYLQSEMIIANSGRYSLSSS-------RQKREEEED-------KNGRNVINTRSVS 388
           PSDLLYL+SEMI++++ R+S++S        RQ  +++++        +GR+VIN RSVS
Sbjct: 378 PSDLLYLRSEMILSDNRRFSMTSGSRPSVGRRQHHQKQQNAVVKGPSSDGRSVINGRSVS 437

Query: 389 EITGLNRFANR 421
           EITGLNRF++R
Sbjct: 438 EITGLNRFSDR 448


>ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thaliana]
           gi|58743300|gb|AAW81728.1| At5g05810 [Arabidopsis
           thaliana] gi|61656157|gb|AAX49381.1| At5g05810
           [Arabidopsis thaliana] gi|332003545|gb|AED90928.1|
           RING-H2 finger protein ATL43 [Arabidopsis thaliana]
          Length = 353

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 5/126 (3%)
 Frame = +2

Query: 47  RRSVDSAIS-----RKRSESVAVGCFDRGVRKDGLLLSETAKAADRENFLRRFDHRIILS 211
           RRS+DS++       ++SESVAV C DR  RKDGLLL       +RE+F  RF+HRII+S
Sbjct: 211 RRSLDSSLKVNDAGEEKSESVAVNCLDRLQRKDGLLL-----IPNRESFEGRFEHRIIIS 265

Query: 212 TECGSHKRWSDLKPSDLLYLQSEMIIANSGRYSLSSSRQKREEEEDKNGRNVINTRSVSE 391
                 +RWS+++PSDLLYL+SEMI+++  + + +           + GR+VIN RSVSE
Sbjct: 266 GGNRDDQRWSEVRPSDLLYLRSEMILSDCRKLAAA-----------EGGRDVINGRSVSE 314

Query: 392 ITGLNR 409
           +TG+ R
Sbjct: 315 LTGIER 320


>sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL43; Flags: Precursor
           gi|9759106|dbj|BAB09675.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 407

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 5/126 (3%)
 Frame = +2

Query: 47  RRSVDSAIS-----RKRSESVAVGCFDRGVRKDGLLLSETAKAADRENFLRRFDHRIILS 211
           RRS+DS++       ++SESVAV C DR  RKDGLLL       +RE+F  RF+HRII+S
Sbjct: 265 RRSLDSSLKVNDAGEEKSESVAVNCLDRLQRKDGLLL-----IPNRESFEGRFEHRIIIS 319

Query: 212 TECGSHKRWSDLKPSDLLYLQSEMIIANSGRYSLSSSRQKREEEEDKNGRNVINTRSVSE 391
                 +RWS+++PSDLLYL+SEMI+++  + + +           + GR+VIN RSVSE
Sbjct: 320 GGNRDDQRWSEVRPSDLLYLRSEMILSDCRKLAAA-----------EGGRDVINGRSVSE 368

Query: 392 ITGLNR 409
           +TG+ R
Sbjct: 369 LTGIER 374