BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034097
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU93580.1| Putative F-box protein, identical [Solanum demissum]    61   8e-08
gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]    60   1e-07
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    57   2e-06
ref|XP_003594084.1| F-box protein [Medicago truncatula] gi|35548...    57   2e-06
emb|CBI39305.3| unnamed protein product [Vitis vinifera]               57   2e-06

>gb|AAU93580.1| Putative F-box protein, identical [Solanum demissum]
          Length = 261

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/109 (33%), Positives = 55/109 (50%)
 Frame = +1

Query: 28  GCGEILGFGFGFDSTSEQYKVVRITSDMIFLDFSAFRSRVNVFTLGDFDWREVGDGDFKY 207
           GC   L +GFG+D T + YKVV I    I+ D  +  S VN+++L    WR +      +
Sbjct: 35  GCSYYLKYGFGYDETRDDYKVVVI--QCIYEDSGSCDSVVNIYSLKADSWRTINKFQGNF 92

Query: 208 YIDHRSPGVNVNGRLHWKCCEKVDHREYLASVASFDLNSEELSLISFPD 354
            ++  SPG  VNG+L+W     VD    + ++ S DL  E    +  PD
Sbjct: 93  LVN--SPGKFVNGKLYWALSADVDTFN-MCNIISLDLADETWRRLELPD 138


>gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 372

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/109 (33%), Positives = 55/109 (50%)
 Frame = +1

Query: 28  GCGEILGFGFGFDSTSEQYKVVRITSDMIFLDFSAFRSRVNVFTLGDFDWREVGDGDFKY 207
           GC   L +GFG+D T + YKVV I    I+ D  +  S VN+++L    WR +      +
Sbjct: 146 GCSYYLKYGFGYDETRDDYKVVVI--QCIYEDSGSCDSVVNIYSLKADSWRTINKFQGNF 203

Query: 208 YIDHRSPGVNVNGRLHWKCCEKVDHREYLASVASFDLNSEELSLISFPD 354
            ++  SPG  VNG+++W     VD    + ++ S DL  E    +  PD
Sbjct: 204 LVN--SPGKFVNGKIYWALSADVDTFN-MCNIISLDLADETWRRLELPD 249


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/105 (30%), Positives = 55/105 (52%)
 Frame = +1

Query: 49  FGFGFDSTSEQYKVVRITSDMIFLDFSAFRSRVNVFTLGDFDWREVGDGDFKYYIDHRSP 228
           FGFG+D +++ YK+VRI +    +D  +F S V VF+L    WR + D  +       + 
Sbjct: 142 FGFGYDLSNDDYKLVRI-AQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGEN- 199

Query: 229 GVNVNGRLHWKCCEKVDHREYLASVASFDLNSEELSLISFPDFIN 363
           G+  NG LHW   +  D      ++ + DL  E+  ++  P+F++
Sbjct: 200 GIYANGALHWLVSQDPD-STVADTIVALDLGVEDYHVVPKPEFVD 243


>ref|XP_003594084.1| F-box protein [Medicago truncatula] gi|355483132|gb|AES64335.1|
           F-box protein [Medicago truncatula]
          Length = 772

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = +1

Query: 49  FGFGFDSTSEQYKVVRIT-SDMIFLDFSAFRSRVNVFTLGDFDWREVGDGDFKYYIDHRS 225
           +GFG+D +S+ YKVV ++  + +     A +++VNV T+G   WR +    F Y   +  
Sbjct: 553 YGFGYDHSSDTYKVVAVSWYESLINGNRAMKTQVNVHTMGTDYWRRI-QTHFPYRFPNTG 611

Query: 226 PGVNVNGRLHWKCCEKVDHR-EYLASVASFDLNSEELSLISFPDF 357
            G  V+G  +W    + +HR  Y  S+ SFDL +E    I  PD+
Sbjct: 612 TGNFVSGTFNW---FEAEHRFPYTRSIVSFDLETESFREILQPDY 653


>emb|CBI39305.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
 Frame = +1

Query: 1   DFIQLP--HWVGCGEILGFGFGFDSTSEQYKVVRITSDMIFLDFSAFRSRVNVFTLGDFD 174
           +F +LP   ++ C  ++ +GFG+DS ++ YKV R+    I      +  +V VF+L    
Sbjct: 127 EFRRLPPISFMQCFHLVAYGFGYDSIADDYKVTRVGCYCI---GRYYEYQVRVFSLRGNV 183

Query: 175 WREVGDGDFKYYIDHRSPGVNVNGRLHWKCCEKVDHREYLASVASFDLNSEELSLISFPD 354
           WR++   +F  Y+    PG++VNG +++      D   Y  SV   DL SE   ++  PD
Sbjct: 184 WRKI--ENFPCYLFTDEPGIHVNGSINFGGVG--DSENYYWSVVGLDLASESYRMVPLPD 239