BLASTX nr result

ID: Cimicifuga21_contig00034092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034092
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324019.1| multidrug/pheromone exporter, MDR family, AB...   158   4e-37
sp|Q6YUU5.1|MDR_ORYSJ RecName: Full=Putative multidrug resistanc...   149   2e-34
gb|AFW66244.1| hypothetical protein ZEAMMB73_446753 [Zea mays]        149   2e-34
ref|XP_002453447.1| hypothetical protein SORBIDRAFT_04g006100 [S...   149   2e-34
gb|EEE56476.1| hypothetical protein OsJ_05696 [Oryza sativa Japo...   149   2e-34

>ref|XP_002324019.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222867021|gb|EEF04152.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1242

 Score =  158 bits (400), Expect = 4e-37
 Identities = 74/93 (79%), Positives = 85/93 (91%)
 Frame = -1

Query: 281  AFSSQSRILEMLNRTQDLPRRDNIRHSWYAGLGLGAARSLMSCTWALDFWYGGKLISQNY 102
            AFSSQ RIL+ML + Q+ PR++NIR SWYAG+GLG ++SLMSCTWALDFWYGG+LISQ Y
Sbjct: 876  AFSSQDRILKMLGKAQEGPRKENIRQSWYAGIGLGTSQSLMSCTWALDFWYGGRLISQGY 935

Query: 101  ITAKELFQTFMVLVSTGRVIADAGSMTTDLAKG 3
            ITAK LF+TFM+LVSTGRVIADAGSMTTDLAKG
Sbjct: 936  ITAKALFETFMILVSTGRVIADAGSMTTDLAKG 968


>sp|Q6YUU5.1|MDR_ORYSJ RecName: Full=Putative multidrug resistance protein; AltName:
            Full=P-glycoprotein gi|46390962|dbj|BAD16475.1| putative
            multidrug resistance p-glycoprotein [Oryza sativa
            Japonica Group]
          Length = 1245

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/93 (73%), Positives = 85/93 (91%)
 Frame = -1

Query: 281  AFSSQSRILEMLNRTQDLPRRDNIRHSWYAGLGLGAARSLMSCTWALDFWYGGKLISQNY 102
            AFSSQ RIL +  ++QD PR+++IR SW+AGLGLG + SLM+CTWALDFWYGG+L+++++
Sbjct: 871  AFSSQERILRLFEQSQDGPRKESIRQSWFAGLGLGTSMSLMTCTWALDFWYGGRLMAEHH 930

Query: 101  ITAKELFQTFMVLVSTGRVIADAGSMTTDLAKG 3
            I+AKELFQTFM+LVSTGRVIADAGSMTTDLAKG
Sbjct: 931  ISAKELFQTFMILVSTGRVIADAGSMTTDLAKG 963


>gb|AFW66244.1| hypothetical protein ZEAMMB73_446753 [Zea mays]
          Length = 806

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/93 (74%), Positives = 83/93 (89%)
 Frame = -1

Query: 281 AFSSQSRILEMLNRTQDLPRRDNIRHSWYAGLGLGAARSLMSCTWALDFWYGGKLISQNY 102
           AFSSQ RIL + ++ QD PR+++IR SW+AGLGLG + SLM+CTWALDFWYGGKL+++ +
Sbjct: 435 AFSSQDRILRLFDQAQDGPRKESIRQSWFAGLGLGTSMSLMTCTWALDFWYGGKLMAERH 494

Query: 101 ITAKELFQTFMVLVSTGRVIADAGSMTTDLAKG 3
           ITAK LFQTFM+LVSTGRVIADAGSMTTDLAKG
Sbjct: 495 ITAKALFQTFMILVSTGRVIADAGSMTTDLAKG 527


>ref|XP_002453447.1| hypothetical protein SORBIDRAFT_04g006100 [Sorghum bicolor]
            gi|241933278|gb|EES06423.1| hypothetical protein
            SORBIDRAFT_04g006100 [Sorghum bicolor]
          Length = 1236

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/93 (73%), Positives = 84/93 (90%)
 Frame = -1

Query: 281  AFSSQSRILEMLNRTQDLPRRDNIRHSWYAGLGLGAARSLMSCTWALDFWYGGKLISQNY 102
            AFSSQ RIL + ++ QD PR+++IR SW+AGLGLG + SLM+CTWALDFWYGGKL+++++
Sbjct: 865  AFSSQERILRLFDQAQDGPRKESIRQSWFAGLGLGTSMSLMTCTWALDFWYGGKLVAEHH 924

Query: 101  ITAKELFQTFMVLVSTGRVIADAGSMTTDLAKG 3
            IT+K LFQTFM+LVSTGRVIADAGSMTTDLAKG
Sbjct: 925  ITSKALFQTFMILVSTGRVIADAGSMTTDLAKG 957


>gb|EEE56476.1| hypothetical protein OsJ_05696 [Oryza sativa Japonica Group]
          Length = 1221

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/93 (73%), Positives = 85/93 (91%)
 Frame = -1

Query: 281  AFSSQSRILEMLNRTQDLPRRDNIRHSWYAGLGLGAARSLMSCTWALDFWYGGKLISQNY 102
            AFSSQ RIL +  ++QD PR+++IR SW+AGLGLG + SLM+CTWALDFWYGG+L+++++
Sbjct: 847  AFSSQERILRLFEQSQDGPRKESIRQSWFAGLGLGTSMSLMTCTWALDFWYGGRLMAEHH 906

Query: 101  ITAKELFQTFMVLVSTGRVIADAGSMTTDLAKG 3
            I+AKELFQTFM+LVSTGRVIADAGSMTTDLAKG
Sbjct: 907  ISAKELFQTFMILVSTGRVIADAGSMTTDLAKG 939


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