BLASTX nr result

ID: Cimicifuga21_contig00034070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034070
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77819.1| unknown [Picea sitchensis]                              88   1e-15
gb|AFK38664.1| unknown [Medicago truncatula]                           87   3e-15
gb|ACJ85894.1| unknown [Medicago truncatula]                           86   4e-15
gb|AFK39612.1| unknown [Medicago truncatula]                           86   7e-15
gb|ACN85311.1| charged multivesicular body protein 4b [Oryza bra...    84   1e-14

>gb|ADE77819.1| unknown [Picea sitchensis]
          Length = 223

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/78 (50%), Positives = 64/78 (82%)
 Frame = +3

Query: 102 SLSTQEKLNETLETLERRKLVLQEKVSIENERLKGFTKFRNKKASVECVKRKSFYESQLE 281
           +L+T +KLNETLE LE+++ VLQ+K+S+E E+ K FT+ +NK+A+++C+KRK  YE+Q+E
Sbjct: 15  ALATIDKLNETLEMLEKKEKVLQKKISVEIEKAKEFTRRKNKRAAIQCLKRKKLYETQVE 74

Query: 282 QVENIRSQVSDQIRMLKG 335
           Q+ N + ++ DQ+ ML+G
Sbjct: 75  QLGNFQLRIHDQMIMLEG 92


>gb|AFK38664.1| unknown [Medicago truncatula]
          Length = 220

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/94 (46%), Positives = 68/94 (72%)
 Frame = +3

Query: 54  WTKWFGNGCKGDTMGLSLSTQEKLNETLETLERRKLVLQEKVSIENERLKGFTKFRNKKA 233
           +T+ FG   K DT   +L+T +KLNETLE LE+++ VL +K + E E+ K +TK +NKKA
Sbjct: 2   FTRVFGKP-KQDTSSNALATLDKLNETLEMLEKKENVLLKKAAAEVEKAKEYTKRKNKKA 60

Query: 234 SVECVKRKSFYESQLEQVENIRSQVSDQIRMLKG 335
           +++C+KRK  YE Q+EQ+ N + ++ DQ+ ML+G
Sbjct: 61  AIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEG 94


>gb|ACJ85894.1| unknown [Medicago truncatula]
          Length = 206

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 44/94 (46%), Positives = 68/94 (72%)
 Frame = +3

Query: 54  WTKWFGNGCKGDTMGLSLSTQEKLNETLETLERRKLVLQEKVSIENERLKGFTKFRNKKA 233
           +T+ FG   K DT   +L+T +KLNETLE LE+++ VL +K + E E+ K +TK +NKKA
Sbjct: 2   FTRVFGKP-KQDTSSNALATLDKLNETLEMLEKKENVLLKKAAAEVEKAKEYTKRKNKKA 60

Query: 234 SVECVKRKSFYESQLEQVENIRSQVSDQIRMLKG 335
           +++C+KRK  YE Q+EQ+ N + ++ DQ+ ML+G
Sbjct: 61  AIQCLKRKRLYEQQVEQLGNFQLRIYDQMIMLEG 94


>gb|AFK39612.1| unknown [Medicago truncatula]
          Length = 222

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 44/94 (46%), Positives = 66/94 (70%)
 Frame = +3

Query: 54  WTKWFGNGCKGDTMGLSLSTQEKLNETLETLERRKLVLQEKVSIENERLKGFTKFRNKKA 233
           ++K FG   K D    +LST EKLNETL  LE+++ VL +K + E ER K FT+ +NK+A
Sbjct: 6   FSKLFGK-TKQDQQANTLSTLEKLNETLGMLEKKESVLLKKAAAEVERAKEFTRAKNKRA 64

Query: 234 SVECVKRKSFYESQLEQVENIRSQVSDQIRMLKG 335
           +++C+KRK  YE Q+EQ+ N + ++ DQ+ ML+G
Sbjct: 65  AIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEG 98


>gb|ACN85311.1| charged multivesicular body protein 4b [Oryza brachyantha]
          Length = 221

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 40/92 (43%), Positives = 67/92 (72%)
 Frame = +3

Query: 60  KWFGNGCKGDTMGLSLSTQEKLNETLETLERRKLVLQEKVSIENERLKGFTKFRNKKASV 239
           K FG   K  +   +L++ +KL+ETLE LE+++ +L +K ++E E+ KGFTK +NK+A++
Sbjct: 7   KVFGKS-KAQSQATALASIDKLSETLEMLEKKENLLVKKANLEVEKAKGFTKAKNKRAAI 65

Query: 240 ECVKRKSFYESQLEQVENIRSQVSDQIRMLKG 335
           +C+KRK  YE Q+EQ+ N + ++ DQ+ ML+G
Sbjct: 66  QCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEG 97


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