BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034063
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_002893403.1| pentatricopeptide repeat-containing protein ...    73   2e-11
ref|NP_564247.1| pentatricopeptide repeat-containing protein [Ar...    71   1e-10
gb|AAM61409.1| unknown [Arabidopsis thaliana]                          71   1e-10
ref|XP_002512090.1| pentatricopeptide repeat-containing protein,...    69   4e-10

>ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Vitis vinifera]
           gi|297738080|emb|CBI27281.3| unnamed protein product
           [Vitis vinifera]
          Length = 616

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/54 (66%), Positives = 47/54 (87%)
 Frame = -2

Query: 228 DAKAALSVIDEMVAAGFKSSKEMLKKVKRRCIREFDFENDDRMEDLIRRFKIRI 67
           D KAALSVI+EM+ AGF  SKE+LKKV+RRCIRE D+E++D++E L R+FKIR+
Sbjct: 544 DQKAALSVIEEMINAGFAPSKEILKKVRRRCIREMDYESNDQVESLARKFKIRM 597


>ref|XP_002893403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339245|gb|EFH69662.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 630

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 30/54 (55%), Positives = 47/54 (87%)
 Frame = -2

Query: 228 DAKAALSVIDEMVAAGFKSSKEMLKKVKRRCIREFDFENDDRMEDLIRRFKIRI 67
           D K+AL+V+D+M+ AGF+ S+E LKK++RRC+RE D+ENDD++E L ++F+IR+
Sbjct: 555 DPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDYENDDQVEALAKKFQIRM 608


>ref|NP_564247.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75173405|sp|Q9FZD1.1|PPR58_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g26460, mitochondrial; Flags: Precursor
           gi|9797754|gb|AAF98572.1|AC013427_15 Contains similarity
           to a hypothetical protein F21B7.16 gi|7485908 from
           Arabidopsis thaliana BAC F21B7 gb|AC002560 and contains
           multiple PPR PF|01535 repeats and a domain of unknown
           function PF|00668. ESTs gb|T45755, gb|AI993167,
           gb|AV554476, gb|T46823, gb|T41981, gb|AV546597,
           gb|AI099868 come from this gene [Arabidopsis thaliana]
           gi|19698979|gb|AAL91225.1| unknown protein [Arabidopsis
           thaliana] gi|22136300|gb|AAM91228.1| unknown protein
           [Arabidopsis thaliana] gi|332192573|gb|AEE30694.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/54 (55%), Positives = 46/54 (85%)
 Frame = -2

Query: 228 DAKAALSVIDEMVAAGFKSSKEMLKKVKRRCIREFDFENDDRMEDLIRRFKIRI 67
           D K+AL+V+D+M+ AGF+ S+E LKK++RRC+RE D ENDD++E L ++F+IR+
Sbjct: 555 DPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAKKFQIRM 608


>gb|AAM61409.1| unknown [Arabidopsis thaliana]
          Length = 630

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/54 (55%), Positives = 46/54 (85%)
 Frame = -2

Query: 228 DAKAALSVIDEMVAAGFKSSKEMLKKVKRRCIREFDFENDDRMEDLIRRFKIRI 67
           D K+AL+V+D+M+ AGF+ S+E LKK++RRC+RE D ENDD++E L ++F+IR+
Sbjct: 555 DPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAKKFQIRM 608


>ref|XP_002512090.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549270|gb|EEF50759.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/54 (57%), Positives = 43/54 (79%)
 Frame = -2

Query: 228 DAKAALSVIDEMVAAGFKSSKEMLKKVKRRCIREFDFENDDRMEDLIRRFKIRI 67
           D K ALSVI+EM++AGF  SKE LKKV+RRC+RE D+++DDR+  + +  KIR+
Sbjct: 546 DVKTALSVIEEMMSAGFTPSKETLKKVRRRCVREMDYDSDDRVGSVAKNCKIRM 599