BLASTX nr result

ID: Cimicifuga21_contig00034056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034056
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_04663903.1| conserved hypothetical protein [Bifidobacteri...   135   3e-30
ref|ZP_16599980.1| hypothetical protein HMPREF9565_01484, partia...   100   1e-19
gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33] gi|1...    84   6e-18
ref|ZP_02079992.1| hypothetical protein CLOLEP_01442 [Clostridiu...    87   1e-17
ref|ZP_02089938.1| hypothetical protein FAEPRAM212_00169 [Faecal...    88   2e-17

>ref|ZP_04663903.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486] gi|239516221|gb|EEQ56088.1|
           conserved hypothetical protein [Bifidobacterium longum
           subsp. infantis CCUG 52486]
          Length = 94

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/88 (73%), Positives = 68/88 (77%)
 Frame = -3

Query: 324 LRPYSPGGVLKALATARNPWNGPHT*YPPFTAWTTRVSKPVRSPRFRSSASGKAQRTAFA 145
           +RPYSPGG+L ALA  RNPWNGPH  +PPFTAWTTRVS PVRSPRFRSSAS  AQR AFA
Sbjct: 1   MRPYSPGGMLNALAPTRNPWNGPHIQHPPFTAWTTRVSNPVRSPRFRSSASVTAQRPAFA 60

Query: 144 TGVPPDICAFHRSTRNSILPYLPQVNPY 61
            GV PDI  FHR T NS LPY  Q  PY
Sbjct: 61  IGVLPDIYTFHRYTGNSSLPYRTQARPY 88


>ref|ZP_16599980.1| hypothetical protein HMPREF9565_01484, partial [Propionibacterium
           acnes HL053PA2] gi|315078258|gb|EFT50297.1| hypothetical
           protein HMPREF9565_01484 [Propionibacterium acnes
           HL053PA2]
          Length = 48

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = +2

Query: 92  MEFLVERWNAQISGGTPVAKAVLWAFPDAEERKRGERTGLDTLVVHAV 235
           MEFLVERWNAQISGGTPVAKAVLWAFPDAEERKRGERTGLDTLVVHAV
Sbjct: 1   MEFLVERWNAQISGGTPVAKAVLWAFPDAEERKRGERTGLDTLVVHAV 48


>gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33]
           gi|145690754|gb|ABP91259.1| unknown protein
           [Streptococcus suis 98HAH33] gi|145690985|gb|ABP91490.1|
           unknown protein [Streptococcus suis 98HAH33]
           gi|145691080|gb|ABP91585.1| unknown protein
           [Streptococcus suis 98HAH33]
          Length = 186

 Score = 84.0 bits (206), Expect(2) = 6e-18
 Identities = 44/73 (60%), Positives = 46/73 (63%)
 Frame = -1

Query: 266 GMDPTPSTHRLRRGLPGYLSLFAPHAFAXXXXXXXXXXPSPLVFLLISAHSTAPPGIPFS 87
           G DPTPSTHRLRRGLPGYL LFAPHAF            SP VFL IS H TA  GIP S
Sbjct: 20  GKDPTPSTHRLRRGLPGYLILFAPHAFEPQRQLQTREPLSPPVFLHISTHFTATHGIPLS 79

Query: 86  PTFLKSTRIESTL 48
           P+ LK    +S L
Sbjct: 80  PSALKFDSFQSVL 92



 Score = 31.6 bits (70), Expect(2) = 6e-18
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -3

Query: 324 LRPYSPGGVLKALATARNPWNGP 256
           +R YSPGGVL ALA A +P   P
Sbjct: 1   MRSYSPGGVLNALAAALSPGKDP 23


>ref|ZP_02079992.1| hypothetical protein CLOLEP_01442 [Clostridium leptum DSM 753]
           gi|156868561|gb|EDO61933.1| hypothetical protein
           CLOLEP_01442 [Clostridium leptum DSM 753]
          Length = 117

 Score = 87.0 bits (214), Expect(2) = 1e-17
 Identities = 49/87 (56%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = -1

Query: 275 GTRGM-DPTPSTHRLRRGLPGYLSLFAPHAFAXXXXXXXXXXPSPLVFLLISAHSTAPPG 99
           GT G+  PTPS HRLR GLPGYL LFA HAF           PSPLVFL IS H TA PG
Sbjct: 20  GTEGVRPPTPSNHRLRHGLPGYLILFATHAFVLQRQLKPSRPPSPLVFLPISTHFTATPG 79

Query: 98  IPFSPTFLKSTRIESTLRVKPQDYTSD 18
           IP + T LK    + +L VKP D+T D
Sbjct: 80  IPPTSTSLKQDSFKRSLWVKPIDFTPD 106



 Score = 27.3 bits (59), Expect(2) = 1e-17
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -2

Query: 337 LSFSLAAVLPRRGT*SVSYGTEPV 266
           +SF+LAAVLPR  T  V+ GTE V
Sbjct: 1   MSFNLAAVLPRWITYCVNCGTEGV 24


>ref|ZP_02089938.1| hypothetical protein FAEPRAM212_00169 [Faecalibacterium prausnitzii
           M21/2] gi|160943673|ref|ZP_02090905.1| hypothetical
           protein FAEPRAM212_01167 [Faecalibacterium prausnitzii
           M21/2] gi|158445128|gb|EDP22131.1| hypothetical protein
           FAEPRAM212_01167 [Faecalibacterium prausnitzii M21/2]
           gi|158445970|gb|EDP22973.1| hypothetical protein
           FAEPRAM212_00169 [Faecalibacterium prausnitzii M21/2]
          Length = 117

 Score = 87.8 bits (216), Expect(2) = 2e-17
 Identities = 49/92 (53%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
 Frame = -1

Query: 275 GTRGMDP-TPSTHRLRRGLPGYLSLFAPHAFAXXXXXXXXXXPSPLVFLLISAHSTAPPG 99
           GT G++P TPS HRLR GLPGYL LFA H F           PSPLVFL IS HSTA PG
Sbjct: 20  GTEGVNPPTPSNHRLRCGLPGYLILFATHTFEPQRQLVPSRPPSPLVFLPISTHSTATPG 79

Query: 98  IPFSPTFLKSTRIESTLRVKPQDYTSDAINHL 3
           IP +   LK    ES+  V+P D+TS+  + L
Sbjct: 80  IPPTSALLKKNSFESSSWVEPMDFTSNLSSRL 111



 Score = 25.8 bits (55), Expect(2) = 2e-17
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 337 LSFSLAAVLPRRGT*SVSYGTEPV 266
           +SF+LA VLPR  T  V+ GTE V
Sbjct: 1   MSFNLAVVLPRWITYCVNCGTEGV 24