BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034046
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    81   1e-13
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12

>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/64 (60%), Positives = 55/64 (85%)
 Frame = +1

Query: 4   HKNLYFSSQPDSIAELVATNEWSEGLEEKLGKSHSTLSHETVLYVLKKLERNPLKALDFF 183
           H+NLYFSS+P+SI ELV T++WS+GLE++L K + +++HETV+YVLK++E NP KA  FF
Sbjct: 59  HQNLYFSSKPNSIVELVLTSDWSKGLEQELEKCYPSMTHETVVYVLKRMEANPEKAWCFF 118

Query: 184 NWLS 195
           NW+S
Sbjct: 119 NWVS 122


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 36/62 (58%), Positives = 51/62 (82%)
 Frame = +1

Query: 13  LYFSSQPDSIAELVATNEWSEGLEEKLGKSHSTLSHETVLYVLKKLERNPLKALDFFNWL 192
           L+FSS+P+SI ELV  N+WS+ LE +L KS S L+HETV+YVLKKL+++P +  +FFNW+
Sbjct: 59  LFFSSKPNSIVELVLENDWSDELESELEKSSSVLTHETVIYVLKKLDKDPQRTWNFFNWV 118

Query: 193 SE 198
           +E
Sbjct: 119 TE 120


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/65 (55%), Positives = 49/65 (75%)
 Frame = +1

Query: 4   HKNLYFSSQPDSIAELVATNEWSEGLEEKLGKSHSTLSHETVLYVLKKLERNPLKALDFF 183
           HK LY SS+P S+ EL++ N+WS  LE +L  S   L+HETV+YVLKKL+++P KA DFF
Sbjct: 54  HKKLYSSSKPSSLVELLSVNDWSPELETQLENSSPLLTHETVIYVLKKLDKDPHKAWDFF 113

Query: 184 NWLSE 198
           NW+ +
Sbjct: 114 NWVCD 118


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/64 (56%), Positives = 49/64 (76%)
 Frame = +1

Query: 4   HKNLYFSSQPDSIAELVATNEWSEGLEEKLGKSHSTLSHETVLYVLKKLERNPLKALDFF 183
           H  L+FSS P S+ +LV+TN+WSE LE +L   + TL+HETV+YVLK+L++ P KA +FF
Sbjct: 49  HPVLFFSSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFF 108

Query: 184 NWLS 195
           NW S
Sbjct: 109 NWAS 112


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
 Frame = +1

Query: 1   THKNLYFSSQP--DSIAELVATNEWSEGLEEKLGKSHSTLSHETVLYVLKKLERNPLKAL 174
           TH  LYFS++P  +SI EL+ TN+WS+ LE KL     ++ HETVLYV+K+L++NP KA 
Sbjct: 52  THHKLYFSTKPKPNSIVELLLTNDWSQALELKLENRFPSMPHETVLYVIKRLDKNPEKAS 111

Query: 175 DFFNWL 192
            FFNW+
Sbjct: 112 CFFNWV 117