BLASTX nr result

ID: Cimicifuga21_contig00034041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034041
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516134.1| conserved hypothetical protein [Ricinus comm...    89   4e-16
ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like ...    88   6e-16
emb|CBI20722.3| unnamed protein product [Vitis vinifera]               88   6e-16
dbj|BAK61873.1| F-box / LRR-repeat protein [Citrus unshiu]             88   8e-16
ref|XP_003573907.1| PREDICTED: F-box/LRR-repeat protein 15-like ...    87   1e-15

>ref|XP_002516134.1| conserved hypothetical protein [Ricinus communis]
           gi|223544620|gb|EEF46136.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 997

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/90 (50%), Positives = 63/90 (70%)
 Frame = -1

Query: 278 LETLILGKGELDVAFFHALRNHVTLKSLSIVDATVNHANVNQIPVYHDRLRSLQIINCCM 99
           LE L LG+G+L   FFHAL +   LKSL + DAT+ +  V++IP+ HDRLR LQ+I C +
Sbjct: 287 LEVLTLGRGQLGDPFFHALADCSMLKSLYVNDATLGNG-VHEIPINHDRLRHLQLIKCRV 345

Query: 98  LRVSIKCPQLQVLSMKGSKTIFVKLDCPQL 9
           +R+S++CPQL+ LS+K S      L+CP L
Sbjct: 346 VRISVRCPQLETLSLKRSNMAQAVLNCPLL 375


>ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like [Vitis vinifera]
          Length = 922

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/90 (50%), Positives = 59/90 (65%)
 Frame = -1

Query: 278 LETLILGKGELDVAFFHALRNHVTLKSLSIVDATVNHANVNQIPVYHDRLRSLQIINCCM 99
           LETL LGKG L   FF AL +   LK L + DAT+ +  + +IP+YHDRL  LQI  C +
Sbjct: 284 LETLTLGKGTLGDTFFQALADCYMLKRLLVNDATLGNG-IQEIPIYHDRLHHLQITKCRV 342

Query: 98  LRVSIKCPQLQVLSMKGSKTIFVKLDCPQL 9
           LR+S++CPQL+ LS+K S      L+CP L
Sbjct: 343 LRISVRCPQLETLSLKRSSMAHAVLNCPLL 372


>emb|CBI20722.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/90 (50%), Positives = 59/90 (65%)
 Frame = -1

Query: 278 LETLILGKGELDVAFFHALRNHVTLKSLSIVDATVNHANVNQIPVYHDRLRSLQIINCCM 99
           LETL LGKG L   FF AL +   LK L + DAT+ +  + +IP+YHDRL  LQI  C +
Sbjct: 250 LETLTLGKGTLGDTFFQALADCYMLKRLLVNDATLGNG-IQEIPIYHDRLHHLQITKCRV 308

Query: 98  LRVSIKCPQLQVLSMKGSKTIFVKLDCPQL 9
           LR+S++CPQL+ LS+K S      L+CP L
Sbjct: 309 LRISVRCPQLETLSLKRSSMAHAVLNCPLL 338


>dbj|BAK61873.1| F-box / LRR-repeat protein [Citrus unshiu]
          Length = 1068

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/90 (51%), Positives = 63/90 (70%)
 Frame = -1

Query: 278 LETLILGKGELDVAFFHALRNHVTLKSLSIVDATVNHANVNQIPVYHDRLRSLQIINCCM 99
           LE L LG+G+L  AFFHAL +   LKSL++ DAT+ +  V +IP+ HD+LR L+I  C +
Sbjct: 372 LEALTLGRGQLGDAFFHALADCSMLKSLNVNDATLGNG-VQEIPINHDQLRRLEITKCRV 430

Query: 98  LRVSIKCPQLQVLSMKGSKTIFVKLDCPQL 9
           +RVSI+CPQL+ LS+K S      L+CP L
Sbjct: 431 MRVSIRCPQLEHLSLKRSNMAQAVLNCPLL 460


>ref|XP_003573907.1| PREDICTED: F-box/LRR-repeat protein 15-like [Brachypodium
           distachyon]
          Length = 1017

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/92 (47%), Positives = 63/92 (68%)
 Frame = -1

Query: 278 LETLILGKGELDVAFFHALRNHVTLKSLSIVDATVNHANVNQIPVYHDRLRSLQIINCCM 99
           L+TL +GKG L  AFF  L     L +L++ DA++  + + ++ V HD LR LQI+ C +
Sbjct: 308 LKTLTMGKGHLGEAFFQTLAECPLLNTLTVSDASLG-SGIQEVTVNHDGLRELQIVKCRV 366

Query: 98  LRVSIKCPQLQVLSMKGSKTIFVKLDCPQLLE 3
           LRVSI+CPQLQ+LS++ +    V L+CPQLLE
Sbjct: 367 LRVSIRCPQLQLLSLRRTGMAHVSLNCPQLLE 398


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