BLASTX nr result

ID: Cimicifuga21_contig00034030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034030
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002537883.1| Reticulon-4-interacting protein 1, mitochond...   108   3e-22
ref|XP_002300061.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002537288.1| conserved hypothetical protein [Ricinus comm...   108   6e-22
gb|ABK96194.1| unknown [Populus trichocarpa]                          107   1e-21
ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase h...   106   2e-21

>ref|XP_002537883.1| Reticulon-4-interacting protein 1, mitochondrial precursor,
           putative [Ricinus communis] gi|223514725|gb|EEF24500.1|
           Reticulon-4-interacting protein 1, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 199

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/69 (78%), Positives = 61/69 (88%)
 Frame = -2

Query: 208 VAGEVVEIGLGVKNIRVGDKVVAMLSHASGGGLAEFAVAQESLTVRRPPEVSADEGAGLP 29
           VAGEVVE+G GVKN ++GDKVVAM+SH +GGGL+EFAV +ESLTV RPPEVSA EGA LP
Sbjct: 26  VAGEVVEVGPGVKNFKIGDKVVAMVSHLNGGGLSEFAVTKESLTVARPPEVSAAEGAALP 85

Query: 28  VAGLTAHQA 2
           VAGLTA QA
Sbjct: 86  VAGLTAQQA 94


>ref|XP_002300061.1| predicted protein [Populus trichocarpa] gi|222847319|gb|EEE84866.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/69 (79%), Positives = 60/69 (86%)
 Frame = -2

Query: 208 VAGEVVEIGLGVKNIRVGDKVVAMLSHASGGGLAEFAVAQESLTVRRPPEVSADEGAGLP 29
           VAGEVVE+G GV N + GDKVVA+LSH SGGGLAEF VA++SL V RPPEVSA EGAGLP
Sbjct: 79  VAGEVVEVGPGVTNFKTGDKVVAILSHISGGGLAEFVVAKKSLPVARPPEVSAAEGAGLP 138

Query: 28  VAGLTAHQA 2
           VAGLTAHQA
Sbjct: 139 VAGLTAHQA 147


>ref|XP_002537288.1| conserved hypothetical protein [Ricinus communis]
           gi|223516831|gb|EEF25095.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/69 (79%), Positives = 60/69 (86%)
 Frame = -2

Query: 208 VAGEVVEIGLGVKNIRVGDKVVAMLSHASGGGLAEFAVAQESLTVRRPPEVSADEGAGLP 29
           VAGEVVE+G GVKN + GDKVVA LSH  GGGLAEFAVA+ESLTV RPPEVSA EG+ LP
Sbjct: 3   VAGEVVEVGPGVKNFQTGDKVVAHLSHPIGGGLAEFAVAKESLTVARPPEVSAAEGSTLP 62

Query: 28  VAGLTAHQA 2
           +AGLTAHQA
Sbjct: 63  IAGLTAHQA 71


>gb|ABK96194.1| unknown [Populus trichocarpa]
          Length = 329

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/69 (78%), Positives = 59/69 (85%)
 Frame = -2

Query: 208 VAGEVVEIGLGVKNIRVGDKVVAMLSHASGGGLAEFAVAQESLTVRRPPEVSADEGAGLP 29
           VAGEVVE+G GV N + GDKVVA+LSH SGGGLAEF VA++ L V RPPEVSA EGAGLP
Sbjct: 73  VAGEVVEVGPGVTNFKTGDKVVAILSHISGGGLAEFVVAKKGLPVARPPEVSAAEGAGLP 132

Query: 28  VAGLTAHQA 2
           VAGLTAHQA
Sbjct: 133 VAGLTAHQA 141


>ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic
           [Vitis vinifera]
          Length = 329

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/69 (75%), Positives = 62/69 (89%)
 Frame = -2

Query: 208 VAGEVVEIGLGVKNIRVGDKVVAMLSHASGGGLAEFAVAQESLTVRRPPEVSADEGAGLP 29
           VAGEVVE+G GVK+ + GDKVV++LSH SGGGLAEFAVA++++TV RP EVSA EGAGLP
Sbjct: 73  VAGEVVEVGSGVKDFKAGDKVVSVLSHFSGGGLAEFAVAKKNITVSRPAEVSAAEGAGLP 132

Query: 28  VAGLTAHQA 2
           +AGLTAHQA
Sbjct: 133 IAGLTAHQA 141


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