BLASTX nr result

ID: Cimicifuga21_contig00034024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034024
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31817.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002273978.1| PREDICTED: leucine-rich repeat receptor prot...   116   2e-24
ref|XP_002318234.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_004170602.1| PREDICTED: leucine-rich repeat receptor prot...   109   2e-22
ref|XP_004140850.1| PREDICTED: leucine-rich repeat receptor prot...   109   2e-22

>emb|CBI31817.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
 Frame = -3

Query: 323 RSGICQNFTKLSLSGNKDLCGRILGLNCEMKNFGRRPQVLNAWGIAXXXXXXXXXXXXVI 144
           RSG+CQN +K SL+GNKDLCGR LGL C+ K FGR+  ++N W +A            + 
Sbjct: 554 RSGVCQNLSKDSLAGNKDLCGRNLGLECQFKTFGRKSSLVNTWVLAGIVVGCTLITLTIA 613

Query: 143 YAFAR-SIRNKGQSNVVVLDESKLNSSIDPNLYFLSSSRSKEPLSINV 3
           +   +  IRN  QS+   ++ESKLNSSID NLYFLSSSRSKEPLSINV
Sbjct: 614 FGLRKWVIRNSRQSDTEEIEESKLNSSIDQNLYFLSSSRSKEPLSINV 661


>ref|XP_002273978.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
            [Vitis vinifera]
          Length = 1299

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
 Frame = -3

Query: 323  RSGICQNFTKLSLSGNKDLCGRILGLNCEMKNFGRRPQVLNAWGIAXXXXXXXXXXXXVI 144
            RSG+CQN +K SL+GNKDLCGR LGL C+ K FGR+  ++N W +A            + 
Sbjct: 892  RSGVCQNLSKDSLAGNKDLCGRNLGLECQFKTFGRKSSLVNTWVLAGIVVGCTLITLTIA 951

Query: 143  YAFAR-SIRNKGQSNVVVLDESKLNSSIDPNLYFLSSSRSKEPLSINV 3
            +   +  IRN  QS+   ++ESKLNSSID NLYFLSSSRSKEPLSINV
Sbjct: 952  FGLRKWVIRNSRQSDTEEIEESKLNSSIDQNLYFLSSSRSKEPLSINV 999


>ref|XP_002318234.1| predicted protein [Populus trichocarpa] gi|222858907|gb|EEE96454.1|
            predicted protein [Populus trichocarpa]
          Length = 1237

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
 Frame = -3

Query: 323  RSGICQNFTKLSLSGNKDLCGRILGLNCEMKNFGRRPQVLNAWGIAXXXXXXXXXXXXVI 144
            RSGIC N +K+SL+GNKDLCGRILGL+C +K+F  +   LNAWG+A              
Sbjct: 831  RSGICLNLSKISLAGNKDLCGRILGLDCRIKSF-NKSYFLNAWGLAGIAVGCMIVALSTA 889

Query: 143  YAFARSI-RNKGQSNVVVLDESKLNSSIDPNLYFLSSSRSKEPLSINV 3
            +A  + I R+ GQ +   ++E KLNS ID NLYFLSSSRSKEPLSIN+
Sbjct: 890  FALRKWIMRDSGQGDPEEIEERKLNSFIDKNLYFLSSSRSKEPLSINI 937


>ref|XP_004170602.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
            [Cucumis sativus]
          Length = 1298

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/108 (57%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
 Frame = -3

Query: 323  RSGICQNFTKLSLSGNKDLCGRILGLNCEMKNFGRRPQVLNAWGIAXXXXXXXXXXXXVI 144
            RSGICQN +K SL GNKDLCGRILG NC +K+   R  VLN+W +A            V 
Sbjct: 892  RSGICQNLSKSSLVGNKDLCGRILGFNCRIKSL-ERSAVLNSWSVAGIIIVSVLIVLTVA 950

Query: 143  YAFARSIRN-KGQSNVVVLDESKLNSSIDPNLYFLSSSRSKEPLSINV 3
            +A  R I   +  S+   ++ESKLNS IDPNLYFLSSSRSKEPLSINV
Sbjct: 951  FAMRRRIIGIQRDSDPEEMEESKLNSFIDPNLYFLSSSRSKEPLSINV 998


>ref|XP_004140850.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
            [Cucumis sativus]
          Length = 1298

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/108 (57%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
 Frame = -3

Query: 323  RSGICQNFTKLSLSGNKDLCGRILGLNCEMKNFGRRPQVLNAWGIAXXXXXXXXXXXXVI 144
            RSGICQN +K SL GNKDLCGRILG NC +K+   R  VLN+W +A            V 
Sbjct: 892  RSGICQNLSKSSLVGNKDLCGRILGFNCRIKSL-ERSAVLNSWSVAGIIIVSVLIVLTVA 950

Query: 143  YAFARSIRN-KGQSNVVVLDESKLNSSIDPNLYFLSSSRSKEPLSINV 3
            +A  R I   +  S+   ++ESKLNS IDPNLYFLSSSRSKEPLSINV
Sbjct: 951  FAMRRRIIGIQRDSDPEEMEESKLNSFIDPNLYFLSSSRSKEPLSINV 998


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