BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033969
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    81   2e-18
ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-18
ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi...    72   9e-15
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t...    68   8e-13
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10

>ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20540-like [Cucumis sativus]
          Length = 532

 Score = 81.3 bits (199), Expect(2) = 2e-18
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -3

Query: 212 LGACCDHREVELAGVAAERLFQLERHSGAYVLLSNMFAADGKYDDAKRVRKMSNM 48
           L ACC H + + A VAAERLFQLERHSGAYVLLSNM+AA GK++DAKRVR M  +
Sbjct: 417 LSACCKHGQTQQAEVAAERLFQLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKL 471



 Score = 35.8 bits (81), Expect(2) = 2e-18
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -2

Query: 285 GLFEEAK*VIETILNTCSPSEEAIAW 208
           G FEEA+ VI+ +  T SPSEEA+AW
Sbjct: 388 GRFEEAEGVIQRLPKTASPSEEAVAW 413


>ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cucumis sativus]
          Length = 532

 Score = 81.3 bits (199), Expect(2) = 2e-18
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -3

Query: 212 LGACCDHREVELAGVAAERLFQLERHSGAYVLLSNMFAADGKYDDAKRVRKMSNM 48
           L ACC H + + A VAAERLFQLERHSGAYVLLSNM+AA GK++DAKRVR M  +
Sbjct: 417 LSACCKHGQTQQAEVAAERLFQLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKL 471



 Score = 35.8 bits (81), Expect(2) = 2e-18
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -2

Query: 285 GLFEEAK*VIETILNTCSPSEEAIAW 208
           G FEEA+ VI+ +  T SPSEEA+AW
Sbjct: 388 GRFEEAEGVIQRLPKTASPSEEAVAW 413


>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 536

 Score = 72.0 bits (175), Expect(2) = 9e-15
 Identities = 33/52 (63%), Positives = 40/52 (76%)
 Frame = -3

Query: 212 LGACCDHREVELAGVAAERLFQLERHSGAYVLLSNMFAADGKYDDAKRVRKM 57
           L ACC H + E+A  AA+RLF LE HSGAYVLLSN++AA GK D  +R+RKM
Sbjct: 417 LSACCSHGQTEVAEDAAQRLFHLEHHSGAYVLLSNLYAAAGKQDHVRRIRKM 468



 Score = 32.7 bits (73), Expect(2) = 9e-15
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = -2

Query: 294 GPKGLFEEAK*VIETILNTCSPSEEAIAWSLL 199
           G  GL +EAK +I  + N+ SP+E+AIAW  L
Sbjct: 385 GRAGLLKEAKELILKMPNSSSPTEQAIAWRAL 416


>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 525

 Score = 67.8 bits (164), Expect(2) = 8e-13
 Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
 Frame = -3

Query: 212 LGACCDHREVELAGVAAERLFQLERH--SGAYVLLSNMFAADGKYDDAKRVRKM 57
           L ACC+H E +LA +AAE++ QL+ H  SG YVLLSN++AA GK+ DA+RVR M
Sbjct: 420 LSACCNHGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDM 473



 Score = 30.4 bits (67), Expect(2) = 8e-13
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -2

Query: 285 GLFEEAK*VIETILNTCSPSEEAIAW 208
           GLFEEA  +I  I N+ + SEE +AW
Sbjct: 391 GLFEEAMVMIRKITNSWNGSEETLAW 416


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = -3

Query: 212 LGACCDHREVELAGVAAERLFQLERHSGAYVLLSNMFAADGKYDDAKRVRKM 57
           L ACC+H + +LA  AA+RL +LE HSG YVLLSN++AA GK+ DA+RVR M
Sbjct: 418 LSACCNHGQAQLAERAAKRLLRLENHSGVYVLLSNLYAASGKHSDARRVRNM 469