BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033959
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   100   2e-19
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    99   5e-19
dbj|BAJ98559.1| predicted protein [Hordeum vulgare subsp. vulgare]     98   6e-19

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/92 (57%), Positives = 67/92 (72%)
 Frame = -3

Query: 277 GCHPDMKTWNFLIREYCTAGEIDQALTCFNKMLEKNFDVDANLLEVLANGLCIKGRVDNA 98
           GC PD+KTW  LI+ +C A E+D+AL CF KM+EKN D DA+LLEVL NG   + R+D A
Sbjct: 437 GCVPDIKTWTILIQGHCAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGA 496

Query: 97  YTLVIECVDTANLRPSLFTYKNLIQKLLGERK 2
           Y L++E V+TA+L P   TYK +I KLLG RK
Sbjct: 497 YKLLVEMVNTAHLVPWQATYKLMINKLLGVRK 528


>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Brachypodium distachyon]
          Length = 585

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/92 (52%), Positives = 65/92 (70%)
 Frame = -3

Query: 277 GCHPDMKTWNFLIREYCTAGEIDQALTCFNKMLEKNFDVDANLLEVLANGLCIKGRVDNA 98
           GC PD+KTW  LI+ +CTAGE+D+AL    +M+E N D DA+LL+V+  GLC + +VD A
Sbjct: 392 GCAPDLKTWTMLIQGHCTAGEVDKALQYLTEMIENNLDADADLLDVMVRGLCNQDKVDAA 451

Query: 97  YTLVIECVDTANLRPSLFTYKNLIQKLLGERK 2
           YTL +E VD A L P   TYK++I +LL  +K
Sbjct: 452 YTLFVEMVDKAQLNPWQGTYKHIISELLRVKK 483


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323443|gb|EFH53864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 618

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/92 (50%), Positives = 63/92 (68%)
 Frame = -3

Query: 277 GCHPDMKTWNFLIREYCTAGEIDQALTCFNKMLEKNFDVDANLLEVLANGLCIKGRVDNA 98
           GC PD+KTW  LI+ +C   E+D+AL CF  MLEK FD+D+NLL+VL +G  I+ R++ A
Sbjct: 432 GCFPDIKTWTILIQGHCKNNELDRALACFANMLEKGFDIDSNLLDVLIDGFLIQNRIEGA 491

Query: 97  YTLVIECVDTANLRPSLFTYKNLIQKLLGERK 2
              ++E V  AN++P   TYK LI KLL  +K
Sbjct: 492 SIFLMEMVKNANVKPWQSTYKRLIDKLLEIKK 523


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/93 (52%), Positives = 63/93 (67%)
 Frame = -3

Query: 280 NGCHPDMKTWNFLIREYCTAGEIDQALTCFNKMLEKNFDVDANLLEVLANGLCIKGRVDN 101
           +GC PD+KTW  LI+ +C A E+ +AL C  KM+EK+ D DA+LL VL N    + R+D 
Sbjct: 434 HGCLPDIKTWTILIQGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDG 493

Query: 100 AYTLVIECVDTANLRPSLFTYKNLIQKLLGERK 2
           AYTL ++ VD A LRP   TYK LI+KLL  RK
Sbjct: 494 AYTLFMDMVDKARLRPWQATYKLLIEKLLEVRK 526


>dbj|BAJ98559.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 592

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/92 (48%), Positives = 64/92 (69%)
 Frame = -3

Query: 277 GCHPDMKTWNFLIREYCTAGEIDQALTCFNKMLEKNFDVDANLLEVLANGLCIKGRVDNA 98
           GC PD+KTW  LI+ +C AGE+D+AL    +M+EK+ + DA+LL+V+  GLC + + D A
Sbjct: 399 GCTPDLKTWTMLIQGHCAAGEVDKALQYLTEMIEKDLEADADLLDVMVKGLCRQDKFDAA 458

Query: 97  YTLVIECVDTANLRPSLFTYKNLIQKLLGERK 2
           YTL +E VD A L P   TYK++I +LL  +K
Sbjct: 459 YTLFVEMVDNAKLTPWQGTYKHIIAELLRVKK 490