BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033952
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310592.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49
ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48
ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CBI21484.3| unnamed protein product [Vitis vinifera]              190   1e-46
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar...   185   4e-45

>ref|XP_002310592.1| predicted protein [Populus trichocarpa] gi|222853495|gb|EEE91042.1|
           predicted protein [Populus trichocarpa]
          Length = 747

 Score =  197 bits (501), Expect = 7e-49
 Identities = 91/112 (81%), Positives = 104/112 (92%)
 Frame = +3

Query: 3   GLLQEAYNFIKNMPIEPDVIAWGSLLSSCKVHKNVDLARIAAEKLLIIDPENSGAYSALA 182
           GLLQEAY F++NMP+EPDVIAWGSLLSSCKV+KNVDLA++AAE+LL+I+P NSGAYSALA
Sbjct: 526 GLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALA 585

Query: 183 NAYSACRKWDDAARIRKLMKDRGVKKDQGFSWVQIKNKVHVFGVEDGSHPQK 338
           N YS+C KWDDAA+IRKLMK RGVKK+QG SWVQI+NK HVFGVEDG HPQK
Sbjct: 586 NVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQK 637


>ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  196 bits (498), Expect = 2e-48
 Identities = 90/112 (80%), Positives = 105/112 (93%)
 Frame = +3

Query: 3   GLLQEAYNFIKNMPIEPDVIAWGSLLSSCKVHKNVDLARIAAEKLLIIDPENSGAYSALA 182
           GLLQEA+ FI+NMPIEPDVIAWGSLL+SCKVHKNV+LA +AAE+LL+I+PENSGAYSALA
Sbjct: 564 GLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALA 623

Query: 183 NAYSACRKWDDAARIRKLMKDRGVKKDQGFSWVQIKNKVHVFGVEDGSHPQK 338
           N YSAC +W++AA IRK MKD+GVKKDQGFSWVQIKNKVH+FGV+DG HPQ+
Sbjct: 624 NVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQR 675


>ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  193 bits (491), Expect = 1e-47
 Identities = 88/112 (78%), Positives = 102/112 (91%)
 Frame = +3

Query: 3   GLLQEAYNFIKNMPIEPDVIAWGSLLSSCKVHKNVDLARIAAEKLLIIDPENSGAYSALA 182
           GLL+EAYNFI+NMPIEPDV+AWGSLLSSC+VHK VDLA++AAEKLL+IDP NSGAY ALA
Sbjct: 564 GLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALA 623

Query: 183 NAYSACRKWDDAARIRKLMKDRGVKKDQGFSWVQIKNKVHVFGVEDGSHPQK 338
           N  SAC KW+DAA++RK MKD+ VKK+QGFSWVQIKNKVH+FGVED  HPQ+
Sbjct: 624 NTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQR 675


>emb|CBI21484.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  190 bits (482), Expect = 1e-46
 Identities = 86/111 (77%), Positives = 103/111 (92%)
 Frame = +3

Query: 6   LLQEAYNFIKNMPIEPDVIAWGSLLSSCKVHKNVDLARIAAEKLLIIDPENSGAYSALAN 185
           +L+ A+ FI+NMPIEPDVIAWGSLL+SCKVHKNV+LA +AAE+LL+I+PENSGAYSALAN
Sbjct: 370 MLENAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALAN 429

Query: 186 AYSACRKWDDAARIRKLMKDRGVKKDQGFSWVQIKNKVHVFGVEDGSHPQK 338
            YSAC +W++AA IRK MKD+GVKKDQGFSWVQIKNKVH+FGV+DG HPQ+
Sbjct: 430 VYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQR 480


>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
           [Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 786

 Score =  185 bits (469), Expect = 4e-45
 Identities = 81/112 (72%), Positives = 102/112 (91%)
 Frame = +3

Query: 3   GLLQEAYNFIKNMPIEPDVIAWGSLLSSCKVHKNVDLARIAAEKLLIIDPENSGAYSALA 182
           GLLQEA  FI+ MPIEPDV+ WGSLLS+C+VHKN+DL ++AAE+LL+++PENSGAYSALA
Sbjct: 565 GLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALA 624

Query: 183 NAYSACRKWDDAARIRKLMKDRGVKKDQGFSWVQIKNKVHVFGVEDGSHPQK 338
           N YSAC KW++AA+IRK MKD  VKK+QGFSW+++K+KVHVFGVEDG+HP+K
Sbjct: 625 NLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEK 676