BLASTX nr result
ID: Cimicifuga21_contig00033938
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00033938 (375 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326860.1| chromatin remodeling complex subunit [Populu... 130 1e-28 ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267... 129 3e-28 ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arab... 123 1e-26 gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana] 122 2e-26 ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana] ... 122 2e-26 >ref|XP_002326860.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222835175|gb|EEE73610.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 576 Score = 130 bits (327), Expect = 1e-28 Identities = 65/108 (60%), Positives = 78/108 (72%) Frame = +2 Query: 2 LGVSYNLFEKLAGERLKKDEQKKKQREFGRANEDEEIRRILLEKPTLLVLDEGHTPRNTR 181 LG+SY LFE+L GE K + K ED+++R++LLE P LLVLDEGHTPRN R Sbjct: 140 LGISYRLFEELVGEEKSKTKVSDK-------TEDDQVRKVLLELPGLLVLDEGHTPRNDR 192 Query: 182 SHIWKVLGKIKTQKRIILSGTPFQNNFGELHNTLSLVRPKSLDSVLPT 325 S IWK L K++TQKRIILSGTPFQNNF EL+NTL LV+PK D + T Sbjct: 193 SRIWKALSKVQTQKRIILSGTPFQNNFDELYNTLCLVKPKFADEISNT 240 >ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera] Length = 1070 Score = 129 bits (323), Expect = 3e-28 Identities = 66/105 (62%), Positives = 80/105 (76%) Frame = +2 Query: 2 LGVSYNLFEKLAGERLKKDEQKKKQREFGRANEDEEIRRILLEKPTLLVLDEGHTPRNTR 181 LG+SY LFEKLAGER+ D++ KK + + ++R+ILLE P LLVLDEGHTPRN + Sbjct: 626 LGISYTLFEKLAGERVLADQENKKVKV--QDYTKVQVRKILLELPGLLVLDEGHTPRNEQ 683 Query: 182 SHIWKVLGKIKTQKRIILSGTPFQNNFGELHNTLSLVRPKSLDSV 316 S IWK L KI T++RIILSGTPFQNNF EL+NTL LVRPK D + Sbjct: 684 SLIWKALSKIDTERRIILSGTPFQNNFKELYNTLCLVRPKFADRI 728 >ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata] gi|297338134|gb|EFH68551.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata] Length = 1406 Score = 123 bits (309), Expect = 1e-26 Identities = 64/108 (59%), Positives = 79/108 (73%) Frame = +2 Query: 2 LGVSYNLFEKLAGERLKKDEQKKKQREFGRANEDEEIRRILLEKPTLLVLDEGHTPRNTR 181 LG+SYNL+EKLAG + +D++ K RE E ++IR IL+ +P LLVLDE HTPRN R Sbjct: 958 LGISYNLYEKLAGVK-DEDKKTKTVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQR 1016 Query: 182 SHIWKVLGKIKTQKRIILSGTPFQNNFGELHNTLSLVRPKSLDSVLPT 325 S IWK L K++TQKRI+LSGTPFQNNF EL N L L RPK L+ + T Sbjct: 1017 SCIWKTLSKVETQKRILLSGTPFQNNFQELCNVLGLARPKYLERLTST 1064 >gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana] Length = 1465 Score = 122 bits (307), Expect = 2e-26 Identities = 64/108 (59%), Positives = 79/108 (73%) Frame = +2 Query: 2 LGVSYNLFEKLAGERLKKDEQKKKQREFGRANEDEEIRRILLEKPTLLVLDEGHTPRNTR 181 LG+SYNL+EKLAG + +D++ K RE E ++IR IL+ +P LLVLDE HTPRN R Sbjct: 1017 LGISYNLYEKLAGVK-DEDKKTKMVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQR 1075 Query: 182 SHIWKVLGKIKTQKRIILSGTPFQNNFGELHNTLSLVRPKSLDSVLPT 325 S IWK L K++TQKRI+LSGTPFQNNF EL N L L RPK L+ + T Sbjct: 1076 SCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLTST 1123 >ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana] gi|332189724|gb|AEE27845.1| chromatin remodeling 31 [Arabidopsis thaliana] Length = 1410 Score = 122 bits (307), Expect = 2e-26 Identities = 64/108 (59%), Positives = 79/108 (73%) Frame = +2 Query: 2 LGVSYNLFEKLAGERLKKDEQKKKQREFGRANEDEEIRRILLEKPTLLVLDEGHTPRNTR 181 LG+SYNL+EKLAG + +D++ K RE E ++IR IL+ +P LLVLDE HTPRN R Sbjct: 962 LGISYNLYEKLAGVK-DEDKKTKMVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQR 1020 Query: 182 SHIWKVLGKIKTQKRIILSGTPFQNNFGELHNTLSLVRPKSLDSVLPT 325 S IWK L K++TQKRI+LSGTPFQNNF EL N L L RPK L+ + T Sbjct: 1021 SCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLTST 1068