BLASTX nr result

ID: Cimicifuga21_contig00033938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033938
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326860.1| chromatin remodeling complex subunit [Populu...   130   1e-28
ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267...   129   3e-28
ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arab...   123   1e-26
gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]            122   2e-26
ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana] ...   122   2e-26

>ref|XP_002326860.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835175|gb|EEE73610.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 576

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/108 (60%), Positives = 78/108 (72%)
 Frame = +2

Query: 2   LGVSYNLFEKLAGERLKKDEQKKKQREFGRANEDEEIRRILLEKPTLLVLDEGHTPRNTR 181
           LG+SY LFE+L GE   K +   K        ED+++R++LLE P LLVLDEGHTPRN R
Sbjct: 140 LGISYRLFEELVGEEKSKTKVSDK-------TEDDQVRKVLLELPGLLVLDEGHTPRNDR 192

Query: 182 SHIWKVLGKIKTQKRIILSGTPFQNNFGELHNTLSLVRPKSLDSVLPT 325
           S IWK L K++TQKRIILSGTPFQNNF EL+NTL LV+PK  D +  T
Sbjct: 193 SRIWKALSKVQTQKRIILSGTPFQNNFDELYNTLCLVKPKFADEISNT 240


>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
          Length = 1070

 Score =  129 bits (323), Expect = 3e-28
 Identities = 66/105 (62%), Positives = 80/105 (76%)
 Frame = +2

Query: 2   LGVSYNLFEKLAGERLKKDEQKKKQREFGRANEDEEIRRILLEKPTLLVLDEGHTPRNTR 181
           LG+SY LFEKLAGER+  D++ KK +   +     ++R+ILLE P LLVLDEGHTPRN +
Sbjct: 626 LGISYTLFEKLAGERVLADQENKKVKV--QDYTKVQVRKILLELPGLLVLDEGHTPRNEQ 683

Query: 182 SHIWKVLGKIKTQKRIILSGTPFQNNFGELHNTLSLVRPKSLDSV 316
           S IWK L KI T++RIILSGTPFQNNF EL+NTL LVRPK  D +
Sbjct: 684 SLIWKALSKIDTERRIILSGTPFQNNFKELYNTLCLVRPKFADRI 728


>ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp.
            lyrata] gi|297338134|gb|EFH68551.1| hypothetical protein
            ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata]
          Length = 1406

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/108 (59%), Positives = 79/108 (73%)
 Frame = +2

Query: 2    LGVSYNLFEKLAGERLKKDEQKKKQREFGRANEDEEIRRILLEKPTLLVLDEGHTPRNTR 181
            LG+SYNL+EKLAG +  +D++ K  RE     E ++IR IL+ +P LLVLDE HTPRN R
Sbjct: 958  LGISYNLYEKLAGVK-DEDKKTKTVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQR 1016

Query: 182  SHIWKVLGKIKTQKRIILSGTPFQNNFGELHNTLSLVRPKSLDSVLPT 325
            S IWK L K++TQKRI+LSGTPFQNNF EL N L L RPK L+ +  T
Sbjct: 1017 SCIWKTLSKVETQKRILLSGTPFQNNFQELCNVLGLARPKYLERLTST 1064


>gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]
          Length = 1465

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/108 (59%), Positives = 79/108 (73%)
 Frame = +2

Query: 2    LGVSYNLFEKLAGERLKKDEQKKKQREFGRANEDEEIRRILLEKPTLLVLDEGHTPRNTR 181
            LG+SYNL+EKLAG +  +D++ K  RE     E ++IR IL+ +P LLVLDE HTPRN R
Sbjct: 1017 LGISYNLYEKLAGVK-DEDKKTKMVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQR 1075

Query: 182  SHIWKVLGKIKTQKRIILSGTPFQNNFGELHNTLSLVRPKSLDSVLPT 325
            S IWK L K++TQKRI+LSGTPFQNNF EL N L L RPK L+ +  T
Sbjct: 1076 SCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLTST 1123


>ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana]
            gi|332189724|gb|AEE27845.1| chromatin remodeling 31
            [Arabidopsis thaliana]
          Length = 1410

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/108 (59%), Positives = 79/108 (73%)
 Frame = +2

Query: 2    LGVSYNLFEKLAGERLKKDEQKKKQREFGRANEDEEIRRILLEKPTLLVLDEGHTPRNTR 181
            LG+SYNL+EKLAG +  +D++ K  RE     E ++IR IL+ +P LLVLDE HTPRN R
Sbjct: 962  LGISYNLYEKLAGVK-DEDKKTKMVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQR 1020

Query: 182  SHIWKVLGKIKTQKRIILSGTPFQNNFGELHNTLSLVRPKSLDSVLPT 325
            S IWK L K++TQKRI+LSGTPFQNNF EL N L L RPK L+ +  T
Sbjct: 1021 SCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLTST 1068


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