BLASTX nr result

ID: Cimicifuga21_contig00033929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033929
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
emb|CBI20513.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/91 (71%), Positives = 80/91 (87%)
 Frame = -3

Query: 274 ADVKPDSRTFGLLISNSECQEDIIKYFEELQTAKVEATKHVYMALINAYANCGQFEKAKQ 95
           ADVKPDS+TF  L++N EC+EDIIKY+E+L+ A V+ TKHV+MALINAYA+CGQFEKAKQ
Sbjct: 532 ADVKPDSQTFCYLLNNCECEEDIIKYYEKLKCAGVQVTKHVFMALINAYASCGQFEKAKQ 591

Query: 94  VVLYKGIPSKNINEIKSGLVSALASCGKLSD 2
           VVL KG+P K++NEIKS LVSALA  G++SD
Sbjct: 592 VVLDKGVPIKSLNEIKSVLVSALALHGQISD 622


>emb|CBI20513.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/91 (71%), Positives = 80/91 (87%)
 Frame = -3

Query: 274 ADVKPDSRTFGLLISNSECQEDIIKYFEELQTAKVEATKHVYMALINAYANCGQFEKAKQ 95
           ADVKPDS+TF  L++N EC+EDIIKY+E+L+ A V+ TKHV+MALINAYA+CGQFEKAKQ
Sbjct: 302 ADVKPDSQTFCYLLNNCECEEDIIKYYEKLKCAGVQVTKHVFMALINAYASCGQFEKAKQ 361

Query: 94  VVLYKGIPSKNINEIKSGLVSALASCGKLSD 2
           VVL KG+P K++NEIKS LVSALA  G++SD
Sbjct: 362 VVLDKGVPIKSLNEIKSVLVSALALHGQISD 392


>ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Cucumis sativus]
          Length = 1295

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/93 (67%), Positives = 77/93 (82%)
 Frame = -3

Query: 280  KLADVKPDSRTFGLLISNSECQEDIIKYFEELQTAKVEATKHVYMALINAYANCGQFEKA 101
            +LADVKPDS TF  LISN EC+EDIIKY++EL  + V+ATKHV+MALINAYA  GQFEKA
Sbjct: 981  ELADVKPDSITFSYLISNCECEEDIIKYYKELNHSGVQATKHVFMALINAYAAHGQFEKA 1040

Query: 100  KQVVLYKGIPSKNINEIKSGLVSALASCGKLSD 2
            KQV+  +GIP KN+NE++  LVSALAS G+ +D
Sbjct: 1041 KQVISDEGIPVKNLNEVRCVLVSALASNGQTAD 1073


>ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial [Glycine max]
          Length = 755

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/91 (63%), Positives = 74/91 (81%)
 Frame = -3

Query: 274 ADVKPDSRTFGLLISNSECQEDIIKYFEELQTAKVEATKHVYMALINAYANCGQFEKAKQ 95
           ADVKPDS+TF  LISNSE +EDI+KY+EEL+ + + ATK ++MAL+NAYA CGQ EKAK+
Sbjct: 518 ADVKPDSQTFSYLISNSETEEDIVKYYEELKQSGIVATKQIFMALVNAYAACGQLEKAKK 577

Query: 94  VVLYKGIPSKNINEIKSGLVSALASCGKLSD 2
           V+L   IP K++N+IK  LVS LAS GKLS+
Sbjct: 578 VILDPLIPPKSLNQIKGFLVSVLASHGKLSE 608


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  117 bits (294), Expect = 7e-25
 Identities = 57/93 (61%), Positives = 76/93 (81%)
 Frame = -3

Query: 280 KLADVKPDSRTFGLLISNSECQEDIIKYFEELQTAKVEATKHVYMALINAYANCGQFEKA 101
           KLADVKPDS ++  LISN   +E+IIKY+EE++ A ++ +K ++MALINAYA CGQFEKA
Sbjct: 465 KLADVKPDSSSYSYLISNCNNEEEIIKYYEEMKVAGIQVSKQIFMALINAYATCGQFEKA 524

Query: 100 KQVVLYKGIPSKNINEIKSGLVSALASCGKLSD 2
           KQV+L K  P K++NEI+S LVSALAS G+++D
Sbjct: 525 KQVLLDKEFPIKHLNEIRSVLVSALASHGQMTD 557


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