BLASTX nr result
ID: Cimicifuga21_contig00033929
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00033929 (282 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi... 132 2e-29 emb|CBI20513.3| unnamed protein product [Vitis vinifera] 132 2e-29 ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containi... 124 6e-27 ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containi... 117 7e-25 ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2... 117 7e-25 >ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like [Vitis vinifera] Length = 848 Score = 132 bits (333), Expect = 2e-29 Identities = 65/91 (71%), Positives = 80/91 (87%) Frame = -3 Query: 274 ADVKPDSRTFGLLISNSECQEDIIKYFEELQTAKVEATKHVYMALINAYANCGQFEKAKQ 95 ADVKPDS+TF L++N EC+EDIIKY+E+L+ A V+ TKHV+MALINAYA+CGQFEKAKQ Sbjct: 532 ADVKPDSQTFCYLLNNCECEEDIIKYYEKLKCAGVQVTKHVFMALINAYASCGQFEKAKQ 591 Query: 94 VVLYKGIPSKNINEIKSGLVSALASCGKLSD 2 VVL KG+P K++NEIKS LVSALA G++SD Sbjct: 592 VVLDKGVPIKSLNEIKSVLVSALALHGQISD 622 >emb|CBI20513.3| unnamed protein product [Vitis vinifera] Length = 618 Score = 132 bits (333), Expect = 2e-29 Identities = 65/91 (71%), Positives = 80/91 (87%) Frame = -3 Query: 274 ADVKPDSRTFGLLISNSECQEDIIKYFEELQTAKVEATKHVYMALINAYANCGQFEKAKQ 95 ADVKPDS+TF L++N EC+EDIIKY+E+L+ A V+ TKHV+MALINAYA+CGQFEKAKQ Sbjct: 302 ADVKPDSQTFCYLLNNCECEEDIIKYYEKLKCAGVQVTKHVFMALINAYASCGQFEKAKQ 361 Query: 94 VVLYKGIPSKNINEIKSGLVSALASCGKLSD 2 VVL KG+P K++NEIKS LVSALA G++SD Sbjct: 362 VVLDKGVPIKSLNEIKSVLVSALALHGQISD 392 >ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like [Cucumis sativus] Length = 1295 Score = 124 bits (312), Expect = 6e-27 Identities = 63/93 (67%), Positives = 77/93 (82%) Frame = -3 Query: 280 KLADVKPDSRTFGLLISNSECQEDIIKYFEELQTAKVEATKHVYMALINAYANCGQFEKA 101 +LADVKPDS TF LISN EC+EDIIKY++EL + V+ATKHV+MALINAYA GQFEKA Sbjct: 981 ELADVKPDSITFSYLISNCECEEDIIKYYKELNHSGVQATKHVFMALINAYAAHGQFEKA 1040 Query: 100 KQVVLYKGIPSKNINEIKSGLVSALASCGKLSD 2 KQV+ +GIP KN+NE++ LVSALAS G+ +D Sbjct: 1041 KQVISDEGIPVKNLNEVRCVLVSALASNGQTAD 1073 >ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial [Glycine max] Length = 755 Score = 117 bits (294), Expect = 7e-25 Identities = 58/91 (63%), Positives = 74/91 (81%) Frame = -3 Query: 274 ADVKPDSRTFGLLISNSECQEDIIKYFEELQTAKVEATKHVYMALINAYANCGQFEKAKQ 95 ADVKPDS+TF LISNSE +EDI+KY+EEL+ + + ATK ++MAL+NAYA CGQ EKAK+ Sbjct: 518 ADVKPDSQTFSYLISNSETEEDIVKYYEELKQSGIVATKQIFMALVNAYAACGQLEKAKK 577 Query: 94 VVLYKGIPSKNINEIKSGLVSALASCGKLSD 2 V+L IP K++N+IK LVS LAS GKLS+ Sbjct: 578 VILDPLIPPKSLNQIKGFLVSVLASHGKLSE 608 >ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1| predicted protein [Populus trichocarpa] Length = 784 Score = 117 bits (294), Expect = 7e-25 Identities = 57/93 (61%), Positives = 76/93 (81%) Frame = -3 Query: 280 KLADVKPDSRTFGLLISNSECQEDIIKYFEELQTAKVEATKHVYMALINAYANCGQFEKA 101 KLADVKPDS ++ LISN +E+IIKY+EE++ A ++ +K ++MALINAYA CGQFEKA Sbjct: 465 KLADVKPDSSSYSYLISNCNNEEEIIKYYEEMKVAGIQVSKQIFMALINAYATCGQFEKA 524 Query: 100 KQVVLYKGIPSKNINEIKSGLVSALASCGKLSD 2 KQV+L K P K++NEI+S LVSALAS G+++D Sbjct: 525 KQVLLDKEFPIKHLNEIRSVLVSALASHGQMTD 557