BLASTX nr result

ID: Cimicifuga21_contig00033924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033924
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]    101   7e-20
gb|AAA33702.1| Major Cab protein [Petunia x hybrida]                  101   7e-20
gb|AAA33700.1| Major Cab protein [Petunia x hybrida]                  101   7e-20
gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]    101   7e-20
pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting ...   101   7e-20

>gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = -3

Query: 205 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 65
           LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 219 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>gb|AAA33702.1| Major Cab protein [Petunia x hybrida]
          Length = 125

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = -3

Query: 205 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 65
           LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 79  LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 125


>gb|AAA33700.1| Major Cab protein [Petunia x hybrida]
          Length = 76

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = -3

Query: 205 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 65
           LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 30  LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 76


>gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = -3

Query: 205 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 65
           LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 219 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
           Protein Complex From Pea Thylakoid Membranes
          Length = 232

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = -3

Query: 205 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 65
           LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 186 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 232


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